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评估宿主对转移性定植调控的体内小鼠全基因组筛选研究数据。

Genome wide in vivo mouse screen data from studies to assess host regulation of metastatic colonisation.

机构信息

Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK.

Quantitative Biology, IMED, AstraZeneca, Darwin Building (Unit 310), Cambridge Science Park, Milton Road, Cambridge CB4 0WG, UK.

出版信息

Sci Data. 2017 Sep 12;4:170129. doi: 10.1038/sdata.2017.129.

Abstract

The process of metastasis is a multi-stage cascade with prior studies suggesting that the colonisation of the secondary site is the rate limiting step. This process involves contributions from the tumour cells and also non-tumour intrinsic factors such as the stroma and the haematopoietic system. In this study, we present data from screening 810 genetically-modified mouse lines with the experimental metastasis assay where intravenous delivery of murine metastatic melanoma B16-F10 cells was used to assess the formation of pulmonary metastasic foci. To date, these data have been studied with a two-step process cumulating in an integrative data analysis to identify genes controlling metastatic colonisation. We present the raw data, and a description to support fresh analyses where researchers can look both within and across gene sets to further elucidate process that regulate metastatic colonisation.

摘要

转移的过程是一个多阶段的级联反应,先前的研究表明,次级部位的定植是限速步骤。这个过程涉及肿瘤细胞的贡献,也涉及非肿瘤固有因素,如基质和造血系统。在这项研究中,我们展示了通过实验性转移测定筛选 810 条基因修饰小鼠品系的数据,其中静脉注射鼠转移性黑色素瘤 B16-F10 细胞用于评估肺转移灶的形成。迄今为止,这些数据已经通过两步过程进行了研究,最终进行了综合数据分析,以确定控制转移定植的基因。我们提供了原始数据,并提供了描述,以支持新的分析,研究人员可以在基因集内和跨基因集进行分析,以进一步阐明调节转移定植的过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51eb/5827107/02ca387e7f29/sdata2017129-f1.jpg

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