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自然种群中的遗传背景和隐性特征复杂性。

Genetic backgrounds and hidden trait complexity in natural populations.

机构信息

Université de Strasbourg, CNRS, GMGM UMR 7156, F-67000 Strasbourg, France.

Université de Strasbourg, CNRS, GMGM UMR 7156, F-67000 Strasbourg, France.

出版信息

Curr Opin Genet Dev. 2017 Dec;47:48-53. doi: 10.1016/j.gde.2017.08.009. Epub 2017 Sep 12.

DOI:10.1016/j.gde.2017.08.009
PMID:28915487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5716861/
Abstract

Dissecting the genetic basis of natural phenotypic variation is a major goal in biology. We know that most traits are strongly heritable. However, their genetic architecture is a long-standing question, which is unfortunately confounded by the lack of complete knowledge of the genetic components as well as their phenotypic effect in a specific genetic background. Many genetic variants are known to affect phenotypes but the same functional variant can have a different effect on the phenotype in different individuals of the same species. Understanding the impact of genetic background on the expressivity of a given phenotype is essential because this effect complicates our ability to predict phenotype from genotype. Here, we briefly review recent progress on the exploration of the effect of genetic background and we discuss how a deeper characterization of the inheritance, expressivity and genetic interactions hidden behind the phenotypic landscape of natural variation could provide a better understanding of the relationship between genotype and phenotype.

摘要

解析自然表型变异的遗传基础是生物学的主要目标。我们知道,大多数性状具有很强的遗传性。然而,它们的遗传结构是一个长期存在的问题,不幸的是,由于缺乏对特定遗传背景下遗传成分及其表型效应的完整了解,这一问题变得更加复杂。许多遗传变异已知会影响表型,但同一功能变异在同一物种的不同个体中可能对表型有不同的影响。了解遗传背景对给定表型表达的影响至关重要,因为这种影响增加了我们根据基因型预测表型的难度。在这里,我们简要回顾了最近在探索遗传背景影响方面的进展,并讨论了如何更深入地描述自然变异表型景观背后的遗传、表达和遗传相互作用,这可以更好地理解基因型和表型之间的关系。

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本文引用的文献

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2
Mastering genomic terminology.掌握基因组学术语。
Genet Med. 2017 May;19(5):491-492. doi: 10.1038/gim.2016.139. Epub 2016 Sep 22.
3
The search for modifier genes in Huntington disease - Multifactorial aspects of a monogenic disorder.亨廷顿舞蹈病修饰基因的探索——单基因疾病的多因素特征
Mol Cell Probes. 2016 Dec;30(6):404-409. doi: 10.1016/j.mcp.2016.06.006. Epub 2016 Jul 12.
4
The Hidden Complexity of Mendelian Traits across Natural Yeast Populations.自然酵母群体中孟德尔性状的隐藏复杂性。
Cell Rep. 2016 Jul 26;16(4):1106-1114. doi: 10.1016/j.celrep.2016.06.048. Epub 2016 Jul 7.
5
1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana.1135个基因组揭示了拟南芥多态性的全球模式。
Cell. 2016 Jul 14;166(2):481-491. doi: 10.1016/j.cell.2016.05.063. Epub 2016 Jun 9.
6
Candidate genetic modifiers of retinitis pigmentosa identified by exploiting natural variation in Drosophila.通过利用果蝇的自然变异鉴定出的视网膜色素变性候选基因修饰因子。
Hum Mol Genet. 2016 Feb 15;25(4):651-9. doi: 10.1093/hmg/ddv502. Epub 2015 Dec 11.
7
A global reference for human genetic variation.人类遗传变异的全球参考。
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The UK10K project identifies rare variants in health and disease.英国万人基因组计划识别健康与疾病中的罕见变异。
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Wild worm embryogenesis harbors ubiquitous polygenic modifier variation.野生蠕虫胚胎发育存在普遍的多基因修饰变异。
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