Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA 94158, USA.
Department of Chemistry, University of Wisconsin, Madison, WI 53706, USA.
Cell Chem Biol. 2017 Oct 19;24(10):1250-1258.e4. doi: 10.1016/j.chembiol.2017.08.007. Epub 2017 Sep 14.
To dissect the cellular roles of individual kinases, it is useful to design tools for their selective activation. We describe the engineering of a split-cAbl kinase (sKin-Abl) that is rapidly activated in cells with rapamycin and allows temporal, dose, and compartmentalization control. Our design strategy involves an empirical screen in mammalian cells and identification of split site in the N lobe. This split site leads to complete loss of activity, which can be restored upon small-molecule-induced dimerization in cells. Remarkably, the split site is transportable to the related Src Tyr kinase and the distantly related Ser/Thr kinase, AKT, suggesting broader applications to kinases. To quantify the fold induction of phosphotyrosine (pTyr) modification, we employed quantitative proteomics, NeuCode SILAC. We identified a number of known Abl substrates, including autophosphorylation sites and novel pTyr targets, 432 pTyr sites in total. We believe that this split-kinase technology will be useful for direct activation of protein kinases in cells.
为了剖析单个激酶的细胞功能,设计用于其选择性激活的工具是很有用的。我们描述了一种分割的 Abl 激酶(sKin-Abl)的工程设计,它可以在雷帕霉素存在的细胞中快速激活,并允许时间、剂量和区室控制。我们的设计策略涉及哺乳动物细胞中的经验筛选和 N 结构域中分割位点的鉴定。这个分割位点导致完全丧失活性,但可以在细胞中小分子诱导二聚化后恢复。值得注意的是,这个分割位点可以转移到相关的Src Tyr 激酶和远缘的 Ser/Thr 激酶 AKT,这表明它可以更广泛地应用于激酶。为了定量诱导磷酸酪氨酸(pTyr)修饰的倍数,我们采用了定量蛋白质组学 NeuCode SILAC。我们鉴定了许多已知的 Abl 底物,包括自身磷酸化位点和新的 pTyr 靶标,总共 432 个 pTyr 位点。我们相信,这种分裂激酶技术将有助于在细胞中直接激活蛋白激酶。