Pan Tong, He Hairong, Wang Xiaochong, Shen Yibo, Zhao Junwei, Yan Kai, Wang Xiangjing, Liu Chongxi, Zhang Ji, Xiang Wensheng
Key Laboratory of Agriculture Biological Functional Gene of Heilongjiang Provincial Education Committee, Northeast Agricultural University, Harbin 150030, PR China.
Shenzhen Institute for Drug Control, ShenZhen 518057, PR China.
Int J Syst Evol Microbiol. 2017 Nov;67(11):4449-4455. doi: 10.1099/ijsem.0.002312. Epub 2017 Sep 18.
A novel Gram-stain-positive, motile, endospore-forming, rod-shaped bacterial strain, NEAU-cbsb5, was isolated from forest soil from Changbai Mountain, Heilongjiang Province, China. The isolate grew at 15-40 °C (optimum 30 °C), at pH 6.0-8.0 (optimum pH 7.0) and in the presence of up to 4 % (w/v) NaCl, although NaCl was not required for growth. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain NEAU-cbsb5 formed a distinct lineage within the genus Bacillus and was most closely related to Bacillus acidiceler DSM 18954 (99.1 % similarity) and Bacillus luciferensis JCM 12212 (99.0 %). 16S rRNA gene sequence similarity to sequences of the type strains of other Bacillus species was less than 96.0 %. Average nucleotide identity (ANI) values between NEAU-cbsb5 and its most closely related species were 78.72-84.75 % by ANIm, ANIb and OrthoANIu analysis. The in silico DNA-DNA hybridization values between strain NEAU-cbsb5 and its close relatives B. acidiceler DSM 18954 and B. luciferensis JCM 12212 were both 23.80 %, again indicating they belong to different taxa. The major cellular fatty acids of NEAU-cbsb5 were iso-C15 : 0, anteiso-C15 : 0 and C16 : 0. The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and an unknown aminophospholipid. The cell-wall peptidoglycan contained meso-diaminopimelic acid and the predominant menaquinones were MK-7 and MK-6. The genomic DNA G+C content was 33.0 mol%. Based on the phylogenetic, phenotypic and chemotaxonomic data, strain NEAU-cbsb5 was classified as a representative of a novel species in the genus Bacillus, for which the name Bacillus solisilvae sp. nov. is proposed. The type strain is NEAU-cbsb5 (=CGMCC 1.14993=DSM 100485).
从中国黑龙江省长白山森林土壤中分离出一株新型革兰氏阳性、具运动性、形成芽孢的杆状细菌菌株NEAU-cbsb5。该菌株在15-40 °C(最适温度30 °C)、pH 6.0-8.0(最适pH 7.0)以及高达4 %(w/v)NaCl存在的条件下生长,不过生长并不需要NaCl。基于16S rRNA基因序列的系统发育分析表明,菌株NEAU-cbsb5在芽孢杆菌属内形成了一个独特的分支,与嗜酸芽孢杆菌DSM 18954(相似度99.1 %)和发光芽孢杆菌JCM 12212(相似度99.0 %)关系最为密切。与其他芽孢杆菌属模式菌株的16S rRNA基因序列相似度低于96.0 %。通过ANIm、ANIb和OrthoANIu分析,NEAU-cbsb5与其关系最密切的物种之间的平均核苷酸同一性(ANI)值为78.72-84.75 %。菌株NEAU-cbsb5与其近亲嗜酸芽孢杆菌DSM 18954和发光芽孢杆菌JCM 12212之间的电子DNA-DNA杂交值均为23.80 %,再次表明它们属于不同的分类单元。NEAU-cbsb5的主要细胞脂肪酸为异-C15 : 0、anteiso-C15 : 0和C16 : 0。极性脂质为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和一种未知的氨基磷脂。细胞壁肽聚糖含有内消旋二氨基庚二酸,主要的甲基萘醌为MK-7和MK-6。基因组DNA G+C含量为33.0 mol%。基于系统发育、表型和化学分类学数据,菌株NEAU-cbsb5被归类为芽孢杆菌属一个新物种的代表,为此提议将其命名为土壤芽孢杆菌(Bacillus solisilvae sp.nov.)。模式菌株为NEAU-cbsb5(=CGMCC 1.14993=DSM 100485)。