Chen Shi-Lin, Song Jing-Yuan
Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China.
Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100193, China.
Zhongguo Zhong Yao Za Zhi. 2016 Nov;41(21):3881-3889. doi: 10.4268/cjcmm20162101.
Traditional Chinese medicine (TCM) has contributad greatly to improving human health. However, the biological characteristics and molecular mechanisms of TCM in the treatment of human diseases remain largely unknown. Genomics plays an important role in modern medicine and biology. Here, we introduce genomics and other related omics to the study of herbs to propose a new discipline, Herbgenomics, that aims to uncover the genetic information and regulatory networks of herbs and to clarify their molecular mechanisms in the prevention and treatment of human diseases. Herbgenomics includes herbal structural genomics, functional genomics, transcriptomics, proteomics, metabonomics, epigenomics and metagenomics. Genomic information, together with transcriptomic, proteomic, and metabolomic data, can therefore be used to predict secondary metabolite biosynthetic pathways and their regulation, triggering a revolution in discovery-based research aimed at understanding the genetics and biology of herbs. Herbgenomics provides an effective platform to support chemical and biological analyses of complex herbal products that may contain more than one active component. Herbgenomics is now being applied to many areas of herb related biological research to help understand the quality of traditional medicines and for molecular herb identification through the establishment of an herbal gene bank. Moreover, functional genomics can contribute to model herb research platforms, geoherbal research, genomics-assisted herb breeding, and herbal synthetic biology, all of which are important for securing the future of medicinal plants and their active compounds. In addition, Herbgenomics will facilitate the elucidation of the targets and mechanism of herbs in disease treatment and provide support for personalized precise medicine.Herbgenomics will accelerate the application of cutting-edge technologies in herbal research and provide an unprecedented opportunity to revolutionize the use and acceptance of traditional herbal medicines.
传统中医(TCM)为改善人类健康做出了巨大贡献。然而,中医治疗人类疾病的生物学特性和分子机制在很大程度上仍不为人知。基因组学在现代医学和生物学中发挥着重要作用。在此,我们将基因组学和其他相关组学引入草药研究,提出一门新学科——草药基因组学,其旨在揭示草药的遗传信息和调控网络,并阐明它们在预防和治疗人类疾病中的分子机制。草药基因组学包括草药结构基因组学、功能基因组学、转录组学、蛋白质组学、代谢组学、表观基因组学和宏基因组学。因此,基因组信息连同转录组、蛋白质组和代谢组数据可用于预测次生代谢物生物合成途径及其调控,引发旨在理解草药遗传学和生物学的基于发现的研究的一场革命。草药基因组学提供了一个有效的平台,以支持对可能含有不止一种活性成分的复杂草药产品进行化学和生物学分析。草药基因组学目前正应用于许多与草药相关的生物学研究领域,以帮助理解传统药物的质量,并通过建立草药基因库进行分子草药鉴定。此外,功能基因组学可有助于建立模式草药研究平台、道地草药研究、基因组学辅助草药育种以及草药合成生物学,所有这些对于确保药用植物及其活性化合物的未来都很重要。此外,草药基因组学将有助于阐明草药在疾病治疗中的靶点和机制,并为个性化精准医学提供支持。草药基因组学将加速前沿技术在草药研究中的应用,并为彻底改变传统草药的使用和接受度提供前所未有的机会。