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药用植物基因组的发展与应用综述

Review on the Development and Applications of Medicinal Plant Genomes.

作者信息

Cheng Qi-Qing, Ouyang Yue, Tang Zi-Yu, Lao Chi-Chou, Zhang Yan-Yu, Cheng Chun-Song, Zhou Hua

机构信息

State Key Laboratory of Quality Research in Chinese Medicine, Faculty of Chinese Medicine, Macau University of Science and Technology, Taipa, Macao SAR, China.

Lushan Botanical Garden, Chinese Academy of Sciences, Jiujiang, China.

出版信息

Front Plant Sci. 2021 Dec 23;12:791219. doi: 10.3389/fpls.2021.791219. eCollection 2021.

Abstract

With the development of sequencing technology, the research on medicinal plants is no longer limited to the aspects of chemistry, pharmacology, and pharmacodynamics, but reveals them from the genetic level. As the price of next-generation sequencing technology becomes affordable, and the long-read sequencing technology is established, the medicinal plant genomes with large sizes have been sequenced and assembled more easily. Although the review of plant genomes has been reported several times, there is no review giving a systematic and comprehensive introduction about the development and application of medicinal plant genomes that have been reported until now. Here, we provide a historical perspective on the current situation of genomes in medicinal plant biology, highlight the use of the rapidly developing sequencing technologies, and conduct a comprehensive summary on how the genomes apply to solve the practical problems in medicinal plants, like genomics-assisted herb breeding, evolution history revelation, herbal synthetic biology study, and geoherbal research, which are important for effective utilization, rational use and sustainable protection of medicinal plants.

摘要

随着测序技术的发展,对药用植物的研究不再局限于化学、药理学和药效学方面,而是从基因层面揭示它们。随着下一代测序技术价格变得可承受,以及长读长测序技术的建立,大基因组的药用植物已更容易进行测序和组装。尽管植物基因组的综述已多次报道,但至今尚无关于已报道的药用植物基因组的发展和应用进行系统全面介绍的综述。在此,我们从历史角度审视药用植物生物学中基因组的现状,突出快速发展的测序技术的应用,并全面总结基因组如何应用于解决药用植物中的实际问题,如基因组辅助草药育种、揭示进化历史、草药合成生物学研究和道地药材研究,这些对于药用植物的有效利用、合理使用和可持续保护至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f387/8732986/a2751e2e7bdd/fpls-12-791219-g001.jpg

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