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()-(-)-[2-(1-吲哚-3-基)乙基]-1-(蒽-9-基)甲亚胺的晶体结构与密度泛函理论研究

Crystal structure and DFT study of ()--[2-(1-indol-3-yl)eth-yl]-1-(anthracen-9-yl)methanimine.

作者信息

Faizi Md Serajul Haque, Dege Necmi, Malinkin Sergey, Sliva Tetyana Yu

机构信息

Department of Chemistry, College of Science, Sultan Qaboos University, PO Box 36 Al-Khod 123, Muscat, Sultanate of Oman.

Ondokuz Mayıs University, Arts and Sciences Faculty, Department of Physics, 55139 Atakum-Samsun, Turkey.

出版信息

Acta Crystallogr E Crystallogr Commun. 2017 Aug 11;73(Pt 9):1329-1332. doi: 10.1107/S2056989017011483. eCollection 2017 Sep 1.

Abstract

The title compound, CHN, (), was synthesized from the condensation reaction of anthracene-9-carbaldehyde and tryptamine in dry ethanol. The indole ring system (r.m.s. deviation = 0.016 Å) makes a dihedral angle of 63.56 (8)° with the anthracene ring (r.m.s. deviation = 0.023 Å). There is a short intra-molecular C-H⋯N inter-action present, and a C-H⋯π inter-action involving the two ring systems. In the crystal, the indole H atom forms an inter-molecular N-H⋯π inter-action, linking mol-ecules to form chains along the -axis direction. There are also C-H⋯π inter-actions present, involving the central and terminal rings of the anthracene unit, linking the chains to form an overall two-dimensional layered structure, with the layers parallel to the plane. The density functional theory (DFT) optimized structure, at the B3LYP/6-311 G(d,p) level, is compared with the experimentally determined mol-ecular structure in the solid state.

摘要

标题化合物CHN()由蒽-9-甲醛与色胺在无水乙醇中通过缩合反应合成。吲哚环系(均方根偏差 = 0.016 Å)与蒽环(均方根偏差 = 0.023 Å)形成的二面角为63.56(8)°。存在一个短程分子内C-H⋯N相互作用以及一个涉及两个环系的C-H⋯π相互作用。在晶体中,吲哚H原子形成分子间N-H⋯π相互作用,将分子沿轴方向连接形成链。还存在C-H⋯π相互作用,涉及蒽单元的中心环和末端环,将链连接形成整体二维层状结构,这些层平行于平面。在B3LYP/6-311 G(d,p)水平下的密度泛函理论(DFT)优化结构与固态下实验测定的分子结构进行了比较。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2e3/5588573/82ed3020c6d4/e-73-01329-fig1.jpg

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