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冠状病毒中移动遗传元件s2m的分布与进化史

Distribution and Evolutionary History of the Mobile Genetic Element s2m in Coronaviruses.

作者信息

Tengs Torstein, Jonassen Christine M

机构信息

Norwegian Veterinary Institute, Ullevaalsveien 68, 0454 Oslo, Norway.

Centre for Laboratory Medicine, Østfold Hospital Trust, Kalnesveien 300, 1714 Grålum, Norway.

出版信息

Diseases. 2016 Jul 28;4(3):27. doi: 10.3390/diseases4030027.

DOI:10.3390/diseases4030027
PMID:28933407
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5456283/
Abstract

The mobile genetic element s2m has been described in several families of single-stranded RNA viruses. The function remains elusive, but an increasing number of s2m-containing sequences are being deposited in publicly available databases. Currently, more than 700 coronavirus sequences containing s2m can be found in GenBank, including the severe acute respiratory syndrome (SARS) coronavirus genome. This is an updated review of the pattern of s2m in coronaviruses, the possible functional implications and the evolutionary history.

摘要

移动遗传元件s2m已在几个单链RNA病毒家族中被描述。其功能仍然难以捉摸,但越来越多含有s2m的序列被存入公开可用的数据库中。目前,在GenBank中可以找到700多个含有s2m的冠状病毒序列,包括严重急性呼吸综合征(SARS)冠状病毒基因组。这是一篇关于冠状病毒中s2m模式、可能的功能影响和进化历史的更新综述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/0707509ebf49/diseases-04-00027-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/0e905f21251f/diseases-04-00027-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/9880a2d9481b/diseases-04-00027-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/0707509ebf49/diseases-04-00027-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/0e905f21251f/diseases-04-00027-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/9880a2d9481b/diseases-04-00027-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6146/5456283/0707509ebf49/diseases-04-00027-g003.jpg

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1
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2
Conserved RNA secondary structures and long-range interactions in hepatitis C viruses.丙型肝炎病毒中保守的RNA二级结构和长程相互作用
RNA. 2015 Jul;21(7):1219-32. doi: 10.1261/rna.049338.114. Epub 2015 May 11.
3
Exploring the architecture of viral RNA genomes.探索病毒 RNA 基因组的结构。
利用公开的全基因组废水测序数据检测新冠病毒隐匿谱系
PLoS Pathog. 2025 Jun 9;21(6):e1012850. doi: 10.1371/journal.ppat.1012850. eCollection 2025 Jun.
4
Genomic Evolution Strategy in SARS-CoV-2 Lineage B: Coevolution of Elements.严重急性呼吸综合征冠状病毒2(SARS-CoV-2)B谱系中的基因组进化策略:元件的共同进化
Curr Issues Mol Biol. 2024 Jun 9;46(6):5744-5776. doi: 10.3390/cimb46060344.
5
Unveiling hidden structural patterns in the SARS-CoV-2 genome: Computational insights and comparative analysis.揭示 SARS-CoV-2 基因组中的隐藏结构模式:计算洞察与比较分析。
PLoS One. 2024 Apr 4;19(4):e0298164. doi: 10.1371/journal.pone.0298164. eCollection 2024.
6
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Curr Opin Virol. 2015 Jun;12:66-74. doi: 10.1016/j.coviro.2015.03.018. Epub 2015 Apr 14.
4
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5
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6
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7
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Biochim Biophys Acta. 2011 Nov-Dec;1809(11-12):708-14. doi: 10.1016/j.bbagrm.2011.06.012. Epub 2011 Jul 5.
8
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10
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