• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

室温下使用自由电子激光对金属蛋白和高价金属配合物进行软X射线吸收光谱分析。

Soft x-ray absorption spectroscopy of metalloproteins and high-valent metal-complexes at room temperature using free-electron lasers.

作者信息

Kubin Markus, Kern Jan, Gul Sheraz, Kroll Thomas, Chatterjee Ruchira, Löchel Heike, Fuller Franklin D, Sierra Raymond G, Quevedo Wilson, Weniger Christian, Rehanek Jens, Firsov Anatoly, Laksmono Hartawan, Weninger Clemens, Alonso-Mori Roberto, Nordlund Dennis L, Lassalle-Kaiser Benedikt, Glownia James M, Krzywinski Jacek, Moeller Stefan, Turner Joshua J, Minitti Michael P, Dakovski Georgi L, Koroidov Sergey, Kawde Anurag, Kanady Jacob S, Tsui Emily Y, Suseno Sandy, Han Zhiji, Hill Ethan, Taguchi Taketo, Borovik Andrew S, Agapie Theodor, Messinger Johannes, Erko Alexei, Föhlisch Alexander, Bergmann Uwe, Mitzner Rolf, Yachandra Vittal K, Yano Junko, Wernet Philippe

机构信息

Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, 12489 Berlin, Germany.

Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

出版信息

Struct Dyn. 2017 Sep 1;4(5):054307. doi: 10.1063/1.4986627. eCollection 2017 Sep.

DOI:10.1063/1.4986627
PMID:28944255
原文链接:
https://pmc.ncbi.nlm.nih.gov/articles/PMC5586166/
Abstract

X-ray absorption spectroscopy at the L-edge of 3d transition metals provides unique information on the local metal charge and spin states by directly probing 3d-derived molecular orbitals through 2p-3d transitions. However, this soft x-ray technique has been rarely used at synchrotron facilities for mechanistic studies of metalloenzymes due to the difficulties of x-ray-induced sample damage and strong background signals from light elements that can dominate the low metal signal. Here, we combine femtosecond soft x-ray pulses from a free-electron laser with a novel x-ray fluorescence-yield spectrometer to overcome these difficulties. We present L-edge absorption spectra of inorganic high-valent Mn complexes (Mn ∼ 6-15 mmol/l) with no visible effects of radiation damage. We also present the first L-edge absorption spectra of the oxygen evolving complex (MnCaO) in Photosystem II (Mn < 1 mmol/l) at room temperature, measured under similar conditions. Our approach opens new ways to study metalloenzymes under functional conditions.

摘要

对3d过渡金属L边进行的X射线吸收光谱分析,通过2p - 3d跃迁直接探测源自3d的分子轨道,从而提供有关局部金属电荷和自旋态的独特信息。然而,由于X射线诱导的样品损伤以及来自轻元素的强背景信号(这些信号可能主导低金属信号)等困难,这种软X射线技术在同步加速器设施中很少用于金属酶的机理研究。在此,我们将来自自由电子激光的飞秒软X射线脉冲与一种新型X射线荧光产额光谱仪相结合,以克服这些困难。我们展示了无机高价锰配合物(锰浓度约为6 - 15 mmol/l)的L边吸收光谱,未观察到辐射损伤的明显影响。我们还展示了在室温下,在类似条件下测量的光系统II中析氧复合物(MnCaO)(锰浓度<1 mmol/l)的首个L边吸收光谱。我们的方法为在功能条件下研究金属酶开辟了新途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/22934aa2792d/SDTYAE-000004-054307_1-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/442effc398e8/SDTYAE-000004-054307_1-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/dafcabd8d256/SDTYAE-000004-054307_1-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/f7b3df295572/SDTYAE-000004-054307_1-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/4c4c2e222018/SDTYAE-000004-054307_1-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/22934aa2792d/SDTYAE-000004-054307_1-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/442effc398e8/SDTYAE-000004-054307_1-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/dafcabd8d256/SDTYAE-000004-054307_1-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/f7b3df295572/SDTYAE-000004-054307_1-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/4c4c2e222018/SDTYAE-000004-054307_1-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f534/5586166/22934aa2792d/SDTYAE-000004-054307_1-g005.jpg

相似文献

1
Soft x-ray absorption spectroscopy of metalloproteins and high-valent metal-complexes at room temperature using free-electron lasers.室温下使用自由电子激光对金属蛋白和高价金属配合物进行软X射线吸收光谱分析。
Struct Dyn. 2017 Sep 1;4(5):054307. doi: 10.1063/1.4986627. eCollection 2017 Sep.
2
Element-specific characterization of transient electronic structure of solvated Fe(II) complexes with time-resolved soft X-ray absorption spectroscopy.运用时间分辨软 X 射线吸收光谱技术对溶剂化 Fe(II) 配合物的瞬态电子结构进行元素特异性研究。
Acc Chem Res. 2015 Nov 17;48(11):2957-66. doi: 10.1021/acs.accounts.5b00154. Epub 2015 Oct 21.
3
L-Edge X-ray Absorption Spectroscopy of Dilute Systems Relevant to Metalloproteins Using an X-ray Free-Electron Laser.使用X射线自由电子激光对与金属蛋白相关的稀溶液体系进行L边X射线吸收光谱分析。
J Phys Chem Lett. 2013 Oct 9;4(21):3641-3647. doi: 10.1021/jz401837f.
4
Energy-dispersive X-ray emission spectroscopy using an X-ray free-electron laser in a shot-by-shot mode.采用 X 射线自由电子激光的逐点式能量色散 X 射线发射光谱学。
Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19103-7. doi: 10.1073/pnas.1211384109. Epub 2012 Nov 5.
5
Characterization of the manganese O2-evolving complex and the iron-quinone acceptor complex in photosystem II from a thermophilic cyanobacterium by electron paramagnetic resonance and X-ray absorption spectroscopy.通过电子顺磁共振和X射线吸收光谱法对嗜热蓝细菌光系统II中的锰氧释放复合物和铁醌受体复合物进行表征。
Biochemistry. 1988 May 31;27(11):4021-31. doi: 10.1021/bi00411a019.
6
The electronic structure of Mn in oxides, coordination complexes, and the oxygen-evolving complex of photosystem II studied by resonant inelastic X-ray scattering.通过共振非弹性X射线散射研究氧化物、配位络合物及光系统II析氧络合物中锰的电子结构。
J Am Chem Soc. 2004 Aug 18;126(32):9946-59. doi: 10.1021/ja038579z.
7
X-ray Emission Spectroscopy as an in Situ Diagnostic Tool for X-ray Crystallography of Metalloproteins Using an X-ray Free-Electron Laser.利用X射线自由电子激光的X射线发射光谱作为金属蛋白X射线晶体学的原位诊断工具
Biochemistry. 2018 Aug 7;57(31):4629-4637. doi: 10.1021/acs.biochem.8b00325. Epub 2018 Jun 28.
8
Cr L-Edge X-ray Absorption Spectroscopy of Cr(acac) in Solution with Measured and Calculated Absolute Absorption Cross Sections.Cr(acac)在溶液中的 Cr L-Edge X 射线吸收光谱,具有实测和计算的绝对吸收截面。
J Phys Chem B. 2018 Jul 26;122(29):7375-7384. doi: 10.1021/acs.jpcb.8b04190. Epub 2018 Jul 13.
9
Chemical interactions and dynamics with femtosecond X-ray spectroscopy and the role of X-ray free-electron lasers.化学相互作用和动力学与飞秒 X 射线光谱学及 X 射线自由电子激光的作用。
Philos Trans A Math Phys Eng Sci. 2019 May 20;377(2145):20170464. doi: 10.1098/rsta.2017.0464.
10
X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution.X 射线诱导 Mn L 边的样品损伤:溶液中过渡金属配合物软 X 射线光谱学的案例研究。
Phys Chem Chem Phys. 2018 Jun 20;20(24):16817-16827. doi: 10.1039/c8cp03094d.

引用本文的文献

1
Ultrafast spectroscopy of liquids using extreme-ultraviolet to soft-X-ray pulses.利用极紫外到软X射线脉冲对液体进行超快光谱学研究。
Nat Rev Chem. 2025 Mar;9(3):185-199. doi: 10.1038/s41570-025-00692-9. Epub 2025 Feb 26.
2
Probing soft X-ray induced photoreduction of a model Mn-complex at cryogenic conditions.在低温条件下探测软X射线诱导的模型锰配合物的光还原作用。
J Synchrotron Radiat. 2025 Mar 1;32(Pt 2):399-407. doi: 10.1107/S1600577524012189. Epub 2025 Feb 3.
3
Review of serial femtosecond crystallography including the COVID-19 pandemic impact and future outlook.

本文引用的文献

1
Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers.按需滴样,用于在 X 射线自由电子激光下研究生物催化剂的反应过程。
Nat Methods. 2017 Apr;14(4):443-449. doi: 10.1038/nmeth.4195. Epub 2017 Feb 27.
2
Structure of photosystem II and substrate binding at room temperature.室温下光系统II的结构与底物结合
Nature. 2016 Dec 15;540(7633):453-457. doi: 10.1038/nature20161. Epub 2016 Nov 21.
3
X-ray absorption spectroscopy using a self-seeded soft X-ray free-electron laser.使用自种子软X射线自由电子激光的X射线吸收光谱学。
综述连续飞秒晶体学,包括 COVID-19 大流行的影响和未来展望。
Structure. 2023 Nov 2;31(11):1306-1319. doi: 10.1016/j.str.2023.10.005. Epub 2023 Oct 27.
4
The role of basicity in selective C-H bond activation by transition metal-oxidos.碱度在过渡金属氧化物选择性C-H键活化中的作用
Dalton Trans. 2023 Aug 15;52(32):11005-11016. doi: 10.1039/d3dt01781h.
5
Using X-ray free-electron lasers for spectroscopy of molecular catalysts and metalloenzymes.利用X射线自由电子激光对分子催化剂和金属酶进行光谱分析。
Nat Rev Phys. 2021 Apr;3(4):264-282. doi: 10.1038/s42254-021-00289-3. Epub 2021 Mar 19.
6
Carrier-specific dynamics in 2H-MoTe observed by femtosecond soft x-ray absorption spectroscopy using an x-ray free-electron laser.利用X射线自由电子激光的飞秒软X射线吸收光谱法观察到的2H-MoTe中特定载流子的动力学。
Struct Dyn. 2021 Jan 13;8(1):014501. doi: 10.1063/4.0000048. eCollection 2021 Jan.
7
Chemical interactions and dynamics with femtosecond X-ray spectroscopy and the role of X-ray free-electron lasers.化学相互作用和动力学与飞秒 X 射线光谱学及 X 射线自由电子激光的作用。
Philos Trans A Math Phys Eng Sci. 2019 May 20;377(2145):20170464. doi: 10.1098/rsta.2017.0464.
8
Probing the oxidation state of transition metal complexes: a case study on how charge and spin densities determine Mn L-edge X-ray absorption energies.探究过渡金属配合物的氧化态:电荷和自旋密度如何决定锰L边X射线吸收能量的案例研究。
Chem Sci. 2018 Jul 17;9(33):6813-6829. doi: 10.1039/c8sc00550h. eCollection 2018 Sep 7.
9
Thermodynamics of Proton and Electron Transfer in Tetranuclear Clusters with Mn-OH/OH Motifs Relevant to HO Activation by the Oxygen Evolving Complex in Photosystem II.四核簇中质子和电子转移的热力学研究:与 PSII 中氧释放复合体中 HO 激活相关的 Mn-OH/OH 基序
J Am Chem Soc. 2018 Aug 29;140(34):10900-10908. doi: 10.1021/jacs.8b06426. Epub 2018 Aug 16.
10
Cr L-Edge X-ray Absorption Spectroscopy of Cr(acac) in Solution with Measured and Calculated Absolute Absorption Cross Sections.Cr(acac)在溶液中的 Cr L-Edge X 射线吸收光谱,具有实测和计算的绝对吸收截面。
J Phys Chem B. 2018 Jul 26;122(29):7375-7384. doi: 10.1021/acs.jpcb.8b04190. Epub 2018 Jul 13.
Opt Express. 2016 Oct 3;24(20):22469-22480. doi: 10.1364/OE.24.022469.
4
Viewing the Valence Electronic Structure of Ferric and Ferrous Hexacyanide in Solution from the Fe and Cyanide Perspectives.从铁和氰化物的角度看溶液中三价和二价六氰合铁酸盐的价电子结构
J Phys Chem B. 2016 Jul 28;120(29):7182-94. doi: 10.1021/acs.jpcb.6b04751. Epub 2016 Jul 14.
5
Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer.原始过氧化物酶铁氧中心的晶体结构及其与质子耦合电子转移的关系。
Proc Natl Acad Sci U S A. 2016 Feb 2;113(5):1226-31. doi: 10.1073/pnas.1521664113. Epub 2016 Jan 19.
6
Creation of X-Ray Transparency of Matter by Stimulated Elastic Forward Scattering.通过受激弹性前向散射实现物质的X射线透明性
Phys Rev Lett. 2015 Sep 4;115(10):107402. doi: 10.1103/PhysRevLett.115.107402.
7
Ab Initio Calculations of X-ray Spectra: Atomic Multiplet and Molecular Orbital Effects in a Multiconfigurational SCF Approach to the L-Edge Spectra of Transition Metal Complexes.X射线光谱的从头计算:多组态自洽场方法中原子多重态和分子轨道效应在过渡金属配合物L边光谱中的应用
J Phys Chem Lett. 2012 Dec 6;3(23):3565-70. doi: 10.1021/jz301479j. Epub 2012 Nov 26.
8
Photon-in photon-out hard X-ray spectroscopy at the Linac Coherent Light Source.直线加速器相干光源的光子输入-光子输出硬X射线光谱学。
J Synchrotron Radiat. 2015 May;22(3):612-20. doi: 10.1107/S1600577515004488. Epub 2015 Apr 15.
9
Pulse energy measurement at the SXR instrument.在软X射线仪器上进行脉冲能量测量。
J Synchrotron Radiat. 2015 May;22(3):606-11. doi: 10.1107/S1600577515006098. Epub 2015 Apr 14.
10
Orbital-specific mapping of the ligand exchange dynamics of Fe(CO)5 in solution.溶液中 Fe(CO)5 配体交换动力学的轨道特异性映射。
Nature. 2015 Apr 2;520(7545):78-81. doi: 10.1038/nature14296.