• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

功能 microRNA 靶定的规则。

Rules for functional microRNA targeting.

机构信息

Center for RNA Research, Institute for Basic Science, and School of Biological Sciences, Seoul National University, Seoul 08826, Korea.

Center for RNA Research, Institute for Basic Science, School of Biological Sciences, and Bioinformatics Institute, Seoul National University, Seoul 08826, Korea.

出版信息

BMB Rep. 2017 Nov;50(11):554-559. doi: 10.5483/bmbrep.2017.50.11.179.

DOI:10.5483/bmbrep.2017.50.11.179
PMID:28946941
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5720468/
Abstract

MicroRNAs (miRNAs) are ∼22nt-long single-stranded RNA molecules that form a RNA-induced silencing complex with Argonaute (AGO) protein to post-transcriptionally downregulate their target messenger RNAs (mRNAs). To understand the regulatory mechanisms of miRNA, discovering the underlying functional rules for how miRNAs recognize and repress their target mRNAs is of utmost importance. To determine functional miRNA targeting rules, previous studies extensively utilized various methods including high-throughput biochemical assays and bioinformatics analyses. However, targeting rules reported in one study often fail to be reproduced in other studies and therefore the general rules for functional miRNA targeting remain elusive. In this review, we evaluate previously-reported miRNA targeting rules and discuss the biological impact of the functional miRNAs on gene-regulatory networks as well as the future direction of miRNA targeting research. [BMB Reports 2017; 50(11): 554-559].

摘要

微小 RNA(miRNA)是约 22nt 长的单链 RNA 分子,与 Argonaute(AGO)蛋白形成 RNA 诱导的沉默复合物,从而对其靶信使 RNA(mRNA)进行转录后下调。为了了解 miRNA 的调控机制,发现 miRNA 识别和抑制其靶 mRNA 的潜在功能规则至关重要。为了确定功能 miRNA 靶向规则,以前的研究广泛利用了包括高通量生化测定和生物信息学分析在内的各种方法。然而,一项研究中报告的靶向规则往往不能在其他研究中重现,因此功能 miRNA 靶向的一般规则仍难以捉摸。在这篇综述中,我们评估了以前报道的 miRNA 靶向规则,并讨论了功能 miRNA 对基因调控网络的生物学影响,以及 miRNA 靶向研究的未来方向。[BMB 报告 2017;50(11):554-559]。

相似文献

1
Rules for functional microRNA targeting.功能 microRNA 靶定的规则。
BMB Rep. 2017 Nov;50(11):554-559. doi: 10.5483/bmbrep.2017.50.11.179.
2
Discovering functional microRNA-mRNA regulatory modules in heterogeneous data.在异质数据中发现功能 miRNA-mRNA 调控模块。
Adv Exp Med Biol. 2013;774:267-90. doi: 10.1007/978-94-007-5590-1_14.
3
miRNA-target chimeras reveal miRNA 3'-end pairing as a major determinant of Argonaute target specificity.微小RNA-靶标嵌合体揭示微小RNA 3'端配对是AGO蛋白靶标特异性的主要决定因素。
Nat Commun. 2015 Nov 25;6:8864. doi: 10.1038/ncomms9864.
4
General rules for functional microRNA targeting.通用的功能性 microRNA 靶定规则。
Nat Genet. 2016 Dec;48(12):1517-1526. doi: 10.1038/ng.3694. Epub 2016 Oct 24.
5
Identifying miRNA Targets Using AGO-RIPseq.使用AGO-RIPseq鉴定微小RNA靶标
Methods Mol Biol. 2018;1720:131-140. doi: 10.1007/978-1-4939-7540-2_9.
6
Discovery of microRNA regulatory networks by integrating multidimensional high-throughput data.通过整合多维高通量数据发现 microRNA 调控网络。
Adv Exp Med Biol. 2013;774:251-66. doi: 10.1007/978-94-007-5590-1_13.
7
Exploring complex miRNA-mRNA interactions with Bayesian networks by splitting-averaging strategy.基于拆分-平均策略的贝叶斯网络探究复杂 miRNA-mRNA 相互作用。
BMC Bioinformatics. 2009 Dec 10;10:408. doi: 10.1186/1471-2105-10-408.
8
microRNA strand selection: Unwinding the rules.miRNA 链选择:解开规则。
Wiley Interdiscip Rev RNA. 2021 May;12(3):e1627. doi: 10.1002/wrna.1627. Epub 2020 Sep 20.
9
Bioinformatics method to predict two regulation mechanism: TF-miRNA-mRNA and lncRNA-miRNA-mRNA in pancreatic cancer.预测胰腺癌中TF-miRNA-mRNA和lncRNA-miRNA-mRNA两种调控机制的生物信息学方法。
Cell Biochem Biophys. 2014 Dec;70(3):1849-58. doi: 10.1007/s12013-014-0142-y.
10
Identification and consequences of miRNA-target interactions--beyond repression of gene expression.miRNA 靶标相互作用的鉴定及其后果——超越基因表达抑制。
Nat Rev Genet. 2014 Sep;15(9):599-612. doi: 10.1038/nrg3765. Epub 2014 Jul 15.

引用本文的文献

1
Plant bioactive compounds driven microRNAs (miRNAs): A potential source and novel strategy targeting gene and cancer therapeutics.植物生物活性化合物驱动的微小RNA(miRNA):一种靶向基因和癌症治疗的潜在来源及新策略。
Noncoding RNA Res. 2024 Jun 8;9(4):1140-1158. doi: 10.1016/j.ncrna.2024.06.003. eCollection 2024 Dec.
2
miR-26a/30d/152 are reliable reference genes for miRNA quantification in skin wound age estimation.miR-26a/30d/152是用于皮肤伤口年龄估计中miRNA定量的可靠内参基因。
Forensic Sci Res. 2023 Oct 15;8(3):230-240. doi: 10.1093/fsr/owad037. eCollection 2023 Sep.
3
Secreted miR-210-3p, miR-183-5p and miR-96-5p reduce sensitivity to docetaxel in prostate cancer cells.分泌的miR-210-3p、miR-183-5p和miR-96-5p降低前列腺癌细胞对多西他赛的敏感性。
Cell Death Discov. 2023 Dec 8;9(1):445. doi: 10.1038/s41420-023-01696-4.
4
Circulating miRNAs drive personalized medicine based on subgroup classification in myasthenia gravis patients.循环 miRNA 可根据重症肌无力患者的亚组分类推动个体化医疗。
Neurol Sci. 2023 Nov;44(11):3877-3884. doi: 10.1007/s10072-023-06933-3. Epub 2023 Jul 5.
5
Ubiquitin-specific protease 28: the decipherment of its dual roles in cancer development.泛素特异性蛋白酶28:其在癌症发展中的双重作用解析
Exp Hematol Oncol. 2023 Mar 6;12(1):27. doi: 10.1186/s40164-023-00389-z.
6
Exosomes loaded with miR-665 inhibit the progression of osteosarcoma and .装载有miR-665的外泌体抑制骨肉瘤的进展以及…… (原文此处不完整)
Am J Transl Res. 2022 Oct 15;14(10):7012-7026. eCollection 2022.
7
Exosome Carrier Effects; Resistance to Digestion in Phagolysosomes May Assist Transfers to Targeted Cells; II Transfers of miRNAs Are Better Analyzed via Systems Approach as They Do Not Fit Conventional Reductionist Stoichiometric Concepts.外泌体载体效应;在吞噬溶酶体中抵抗消化可能有助于向靶细胞转移;二 通过系统方法分析 miRNA 的转移效果更好,因为它们不符合传统的还原论计量概念。
Int J Mol Sci. 2022 May 31;23(11):6192. doi: 10.3390/ijms23116192.
8
Multiplexed targeting of microRNA in stem cell-derived extracellular vesicles for regenerative medicine.基于干细胞衍生细胞外囊泡的 microRNA 多重靶向递送来实现再生医学。
BMB Rep. 2022 Feb;55(2):65-71. doi: 10.5483/BMBRep.2022.55.2.182.
9
Circular RNA Circ_0013958 Functions as a Tumor Promoter in Ovarian Cancer by Regulating miR-637/PLXNB2 Axis.环状RNA Circ_0013958通过调控miR-637/PLXNB2轴在卵巢癌中发挥肿瘤促进作用。
Front Genet. 2021 Jul 21;12:644451. doi: 10.3389/fgene.2021.644451. eCollection 2021.
10
Circ_0091579 Serves as a Tumor-Promoting Factor in Hepatocellular Carcinoma Through miR-1225-5p/PLCB1 Axis.环状 RNA 0091579 通过 miR-1225-5p/PLCβ1 轴在肝细胞癌中充当促瘤因子。
Dig Dis Sci. 2022 Feb;67(2):585-597. doi: 10.1007/s10620-021-06861-2. Epub 2021 Feb 8.

本文引用的文献

1
General rules for functional microRNA targeting.通用的功能性 microRNA 靶定规则。
Nat Genet. 2016 Dec;48(12):1517-1526. doi: 10.1038/ng.3694. Epub 2016 Oct 24.
2
Predicting effective microRNA target sites in mammalian mRNAs.预测哺乳动物mRNA中有效的微小RNA靶位点。
Elife. 2015 Aug 12;4:e05005. doi: 10.7554/eLife.05005.
3
A Dynamic Search Process Underlies MicroRNA Targeting.微小RNA靶向作用背后存在一个动态搜索过程。
Cell. 2015 Jul 2;162(1):96-107. doi: 10.1016/j.cell.2015.06.032.
4
MicroRNA silencing for cancer therapy targeted to the tumour microenvironment.靶向肿瘤微环境的用于癌症治疗的微小RNA沉默
Nature. 2015 Feb 5;518(7537):107-10. doi: 10.1038/nature13905. Epub 2014 Nov 17.
5
Structural basis for microRNA targeting.microRNA 靶向作用的结构基础。
Science. 2014 Oct 31;346(6209):608-13. doi: 10.1126/science.1258040.
6
Global and local competition between exogenously introduced microRNAs and endogenously expressed microRNAs.外源性引入的微小RNA与内源性表达的微小RNA之间的全局和局部竞争。
Mol Cells. 2014 May;37(5):412-7. doi: 10.14348/molcells.2014.0100. Epub 2014 May 13.
7
MicroRNA target site identification by integrating sequence and binding information.通过整合序列和结合信息来识别 microRNA 靶位点。
Nat Methods. 2013 Jul;10(7):630-3. doi: 10.1038/nmeth.2489. Epub 2013 May 26.
8
Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding.通过 CLASH 绘制人类 miRNA 相互作用组揭示了频繁的非经典结合。
Cell. 2013 Apr 25;153(3):654-65. doi: 10.1016/j.cell.2013.03.043.
9
Translational repression and eIF4A2 activity are critical for microRNA-mediated gene regulation.翻译:翻译抑制和 eIF4A2 活性对于 microRNA 介导的基因调控至关重要。
Science. 2013 Apr 5;340(6128):82-5. doi: 10.1126/science.1231197.
10
miR-29b moulds the tumour microenvironment to repress metastasis.miR-29b 塑造肿瘤微环境以抑制转移。
Nat Cell Biol. 2013 Feb;15(2):139-40. doi: 10.1038/ncb2684.