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马里亚诺丽脂鲤和条纹丽脂鲤(脂鲤目:脂鲤科)独特的经典与分子细胞遗传学:异染色质和重复基因组织的比较研究

Distinct classical and molecular cytogenetics of Astyanax marionae and A. fasciatus (Characiformes: Characidae): a comparative study of the organization of heterochromatin and repetitive genes.

作者信息

Piscor Diovani, Centofante Liano, Parise-Maltempi Patricia Pasquali

机构信息

Laboratório de Citogenética, Departamento de Biologia, Instituto de Biociências, Universidade Estadual Paulista 'Júlio de Mesquita Filho' (UNESP), Av. 24A, 1515, 13506-900, Rio Claro, SP, Brazil.

出版信息

J Genet. 2017 Sep;96(4):665-671. doi: 10.1007/s12041-017-0813-8.

DOI:10.1007/s12041-017-0813-8
PMID:28947715
Abstract

Genus Astyanax is well distributed in Neotropical freshwater environments and its taxonomic position is uncertain, as is the case with other Characidae genera allocated in the group incertae sedis. This study aimed to analyse the karyotype of different populations of Astyanax fasciatus (Corumbataí River basin) using Giemsa staining, C-band technique, and fluorescence in situ hybridization for the H3 histone and 5S rRNA genes, in addition we describe for the first time the chromosomal organization of H3 histone and 5S rRNAgenes in A. marionae (ParaguayRiver basin). Chromosomes of three A. fasciatus populations were analysed (two with 2n = 50 and one with 2n = 48) and the heterochromatin was organized in two forms (blocks with blurred boundaries and distinct blocks). H3 histone and 5S rRNA genes were observed in all the three populations of A. fasciatus on two chromosome pairs (one metacentric chromosome showing H3 histone and 5S rRNA gene clusters). In A. marionae (2n = 48), H3 histone and 5S rRNA genes were observed in one acrocentric chromosome pair (different pairs). Further, differences between karyotypes and heterochromatin, as well as the chromosomal organization of H3 histone and 5S rRNA genes in Astyanax species, focussing on chromosome evolution in the group are discussed.

摘要

阿氏霓虹脂鲤属广泛分布于新热带区的淡水环境中,其分类地位尚不确定,其他被归入待定类群的脂鲤科属也是如此。本研究旨在利用吉姆萨染色、C带技术以及针对H3组蛋白和5S rRNA基因的荧光原位杂交技术,分析不同种群的阿氏霓虹脂鲤(科伦巴泰河流域)的核型,此外,我们首次描述了马里昂霓虹脂鲤(巴拉圭河流域)中H3组蛋白和5S rRNA基因的染色体组织。分析了三个阿氏霓虹脂鲤种群的染色体(两个种群的2n = 50,一个种群的2n = 48),异染色质以两种形式存在(边界模糊的块状和清晰的块状)。在所有三个阿氏霓虹脂鲤种群的两对染色体上均观察到了H3组蛋白和5S rRNA基因(一条中着丝粒染色体上显示有H3组蛋白和5S rRNA基因簇)。在马里昂霓虹脂鲤(2n = 48)中,在一对近端着丝粒染色体上观察到了H3组蛋白和5S rRNA基因(不同的染色体对)。此外,还讨论了阿氏霓虹脂鲤属物种的核型和异染色质之间的差异,以及H3组蛋白和5S rRNA基因的染色体组织,重点关注该类群的染色体进化。

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本文引用的文献

1
Microsatellite Organization in the B Chromosome and A Chromosome Complement in Astyanax (Characiformes, Characidae) Species.阿氏丽脂鲤(脂鲤目,脂鲤科)物种B染色体和A染色体组中的微卫星组织
Cytogenet Genome Res. 2016;148(1):44-51. doi: 10.1159/000444728. Epub 2016 Mar 19.
2
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: syntenic conservation of repetitive genes.具有不同二倍体数目的八种丽脂鲤属(鱼类,脂鲤目)中H3组蛋白基因和5S rRNA基因的染色体定位:重复基因的同线保守性
Genome. 2016 Mar;59(3):167-72. doi: 10.1139/gen-2015-0112. Epub 2015 Dec 22.
3
Chromosomal Mapping of Repetitive DNA Sequences in Five Species of Astyanax (Characiformes, Characidae) Reveals Independent Location of U1 and U2 snRNA Sites and Association of U1 snRNA and 5S rDNA.
五种丽脂鲤属鱼类(脂鲤目,脂鲤科)重复DNA序列的染色体定位揭示了U1和U2小核RNA位点的独立定位以及U1小核RNA与5S核糖体DNA的关联
Cytogenet Genome Res. 2015;146(2):144-152. doi: 10.1159/000438813. Epub 2015 Sep 2.
4
Basic cytogenetics and physical mapping of ribosomal genes in four Astyanax species (Characiformes, Characidae) collected in Middle Paraná River, Iguassu National Park: considerations on taxonomy and systematics of the genus.巴拉那河中游伊瓜苏国家公园采集的四种丽脂鲤属物种(脂鲤目,脂鲤科)核糖体基因的基础细胞遗传学和物理图谱:关于该属分类学和系统学的思考
Comp Cytogenet. 2015 Feb 9;9(1):51-65. doi: 10.3897/CompCytogen.v9i1.9002. eCollection 2015.
5
Chromosomal microstructure diversity in three Astyanax (Characiformes, Characidae) species: comparative analysis of the chromosomal locations of the 18S and 5S rDNAs.三种丽脂鲤属(脂鲤目,脂鲤科)鱼类的染色体微观结构多样性:18S和5S rDNA染色体定位的比较分析
Zebrafish. 2015 Feb;12(1):81-90. doi: 10.1089/zeb.2014.1036. Epub 2014 Dec 30.
6
Three sympatric karyomorphs in the fish Astyanax fasciatus (Teleostei, Characidae) do not seem to hybridize in natural populations.丽脂鲤属鱼类(硬骨鱼纲,脂鲤科)中的三种同域核型似乎在自然种群中不会杂交。
Comp Cytogenet. 2012 Jan 24;6(1):29-40. doi: 10.3897/CompCytogen.v6i1.2151. eCollection 2012.
7
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Cytogenet Genome Res. 2013;141(2-3):133-42. doi: 10.1159/000354885. Epub 2013 Sep 24.
8
Cytogenetic analysis in three Bryconamericus species (Characiformes, Characidae): first description of the 5S rDNA-bearing chromosome pairs in the genus.三种美洲脂鲤属物种(脂鲤目,脂鲤科)的细胞遗传学分析:该属中含5S rDNA染色体对的首次描述。
Mol Cytogenet. 2013 Apr 1;6(1):13. doi: 10.1186/1755-8166-6-13.
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Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling.基于多位点分析和广泛的内群采样的大型脂鲤科(硬骨鱼纲:骨鳔总目:脂鲤目)鱼类的系统发育关系。
BMC Evol Biol. 2011 Sep 26;11:275. doi: 10.1186/1471-2148-11-275.
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Chromosome mapping of H1 histone and 5S rRNA gene clusters in three species of Astyanax (Teleostei, Characiformes).三种丽脂鲤属鱼类(硬骨鱼纲,脂鲤目)中H1组蛋白和5S rRNA基因簇的染色体定位
Cytogenet Genome Res. 2011;134(1):64-71. doi: 10.1159/000323512. Epub 2011 Jan 19.