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果蝇大肠中Delta-Notch依赖性边界形成的建模与分析

Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine.

作者信息

Liu Fei, Sun Deshun, Murakami Ryutaro, Matsuno Hiroshi

机构信息

Control and Simulation Center, Harbin Institute of Technology, West Dazhi Street 92, Harbin, 150001, People's Republic of China.

School of Software Engineering, South China University of Technology, Building B7, Guangzhou, 510006, People's Republic of China.

出版信息

BMC Syst Biol. 2017 Sep 21;11(Suppl 4):80. doi: 10.1186/s12918-017-0455-8.

Abstract

BACKGROUND

The boundary formation in the Drosophila large intestine is widely studied as an important biological problem. It has been shown that the Delta-Notch signaling pathway plays an essential role in the formation of boundary cells.

RESULTS

In this paper, we propose a mathematical model for the Delta-Notch dependent boundary formation in the Drosophila large intestine in order to better interpret related experimental findings of this biological phenomenon. To achieve this, we not only perform stability analysis on the model from a theoretical point of view, but also perform numerical simulations to analyze the model with and without noises, the phenotype change with the change of Delta or Notch expression, and the perturbation influences of binding and inhibition parameters on the boundary formation.

CONCLUSIONS

By doing all these work, we can assure that our model can better interpret the biological findings related to the boundary formation in the Drosophila large intestine.

摘要

背景

果蝇大肠中的边界形成作为一个重要的生物学问题受到广泛研究。已表明Delta-Notch信号通路在边界细胞的形成中起着至关重要的作用。

结果

在本文中,我们提出了一个关于果蝇大肠中Delta-Notch依赖性边界形成的数学模型,以便更好地解释这一生物学现象的相关实验结果。为实现这一目标,我们不仅从理论角度对模型进行稳定性分析,还进行数值模拟,以分析有噪声和无噪声情况下的模型、Delta或Notch表达变化时的表型变化,以及结合和抑制参数对边界形成的扰动影响。

结论

通过开展所有这些工作,我们可以确保我们的模型能够更好地解释与果蝇大肠中边界形成相关的生物学发现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bdb/5615251/436931aea15c/12918_2017_455_Fig1_HTML.jpg

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