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用于生产高纯度GroEL(一种十四聚体超分子机器)的拆卸/重组策略,适用于定量核磁共振、电子顺磁共振和突变研究。

Disassembly/reassembly strategy for the production of highly pure GroEL, a tetradecameric supramolecular machine, suitable for quantitative NMR, EPR and mutational studies.

作者信息

Wälti Marielle A, Clore G Marius

机构信息

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-0520, United States.

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-0520, United States.

出版信息

Protein Expr Purif. 2018 Feb;142:8-15. doi: 10.1016/j.pep.2017.09.010. Epub 2017 Sep 22.

Abstract

GroEL, a prototypical member of the chaperonin class of chaperones, is a large supramocular machine that assists protein folding and plays an important role in proteostasis. GroEL comprises two heptameric rings, each of which encloses a large cavity that provides a folding chamber for protein substrates. Many questions remain regarding the mechanistic details of GroEL facilitated protein folding. Thus, data at atomic resolution of the type provided by NMR and EPR are invaluable. Such studies often require complete deuteration of GroEL, uniform or residue specific C and N isotope labeling, and the introduction of selective cysteine mutations for site-specific spin labeling. In addition, high purity GroEL is essential for detailed studies of substrate-GroEL interactions as quantitative interpretation is impossible if the cavities are already occupied and blocked by other protein substrates present in the bacterial expression system. Here we present a new purification protocol designed to provide highly pure GroEL devoid of non-specific protein substrate contamination.

摘要

伴侣蛋白GroEL是伴侣蛋白家族的典型成员,是一种大型的超分子机器,它协助蛋白质折叠并在蛋白质稳态中发挥重要作用。GroEL由两个七聚体环组成,每个环都包围着一个大腔,该腔为蛋白质底物提供了一个折叠室。关于GroEL促进蛋白质折叠的机制细节仍有许多问题。因此,核磁共振(NMR)和电子顺磁共振(EPR)提供的原子分辨率数据非常宝贵。此类研究通常需要GroEL完全氘化、均匀或残基特异性的碳(C)和氮(N)同位素标记,以及引入选择性半胱氨酸突变以进行位点特异性自旋标记。此外,高纯度的GroEL对于详细研究底物与GroEL的相互作用至关重要,因为如果细菌表达系统中存在的其他蛋白质底物已经占据并阻塞了腔室,就无法进行定量解释。在这里,我们提出了一种新的纯化方案,旨在提供高度纯净、无非特异性蛋白质底物污染的GroEL。

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本文引用的文献

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Allosteric Mechanisms in Chaperonin Machines.别构机制在分子伴侣机器中的作用。
Chem Rev. 2016 Jun 8;116(11):6588-606. doi: 10.1021/acs.chemrev.5b00556. Epub 2016 Jan 4.
4
Separation of E. coli chaperonin groEL from β-galactosidase without denaturation.在不进行变性处理的情况下将大肠杆菌伴侣蛋白groEL与β-半乳糖苷酶分离。
J Chromatogr B Analyt Technol Biomed Life Sci. 2015 Dec 15;1007:93-9. doi: 10.1016/j.jchromb.2015.11.006. Epub 2015 Nov 10.
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The GroEL-GroES Chaperonin Machine: A Nano-Cage for Protein Folding.GroEL-GroES 伴护蛋白机器:蛋白质折叠的纳米笼。
Trends Biochem Sci. 2016 Jan;41(1):62-76. doi: 10.1016/j.tibs.2015.07.009. Epub 2015 Sep 25.
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Structure and allostery of the chaperonin GroEL.伴侣蛋白 GroEL 的结构与别构调控。
J Mol Biol. 2013 May 13;425(9):1476-87. doi: 10.1016/j.jmb.2012.11.028. Epub 2012 Nov 24.

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