Department of Pharmacology and Toxicology, University of Louisville, Louisville, KY, 40202, USA.
Department of Bioengineering, University of Louisville, Louisville, KY, 40208, USA.
Sci Rep. 2017 Sep 29;7(1):12444. doi: 10.1038/s41598-017-12691-y.
The composition of the extracellular matrix (ECM) proteins and the expression of their cognate receptors dictate cell behavior and dynamics. In particular, the interactions of ECM proteins with integrin receptors are key mediators of these cellular processes, playing a crucial role in the progression of several diseases of the liver, including inflammation, fibrosis/cirrhosis and cancer. This study establishes a modeling approach combining computation and experiments to evaluate the kinetics of integrin receptor binding to hepatic ECM proteins. ECM ligand concentration was derived from LC-MS/MS quantification of the hepatic ECM from mice exposed to chronic carbon tetrachloride (CCl); receptor density was derived from published literature. Mathematical models for ECM-integrin binding kinetics that were developed incorporate receptor divalence and an aggregation scheme to represent clustering. The computer simulations reproduced positive cooperativity in the receptor aggregation model when the aggregation equilibrium constant (K) was positive and greater than K for divalent complex formation. Importantly, the modeling projected an increase in integrin binding for several receptors for which signaling is known to be increased after CCl exposure in the liver. The proposed modeling approach may be of use to elucidate the kinetics of integrin receptor binding to ECM proteins for homeostatic and diseased livers.
细胞外基质 (ECM) 蛋白的组成及其同源受体的表达决定了细胞的行为和动态。特别是,ECM 蛋白与整联蛋白受体的相互作用是这些细胞过程的关键介质,在肝脏的几种疾病(包括炎症、纤维化/肝硬化和癌症)的进展中起着至关重要的作用。本研究建立了一种结合计算和实验的建模方法,以评估整合素受体与肝 ECM 蛋白结合的动力学。通过对暴露于慢性四氯化碳 (CCl) 的小鼠的肝 ECM 进行 LC-MS/MS 定量,得出 ECM 配体浓度;受体密度来自已发表的文献。开发的 ECM-整联蛋白结合动力学数学模型结合了受体二价性和聚集方案来表示聚集。当聚集平衡常数 (K) 为正且大于二价复合物形成的 K 时,受体聚集模型中的计算机模拟再现了正协同作用。重要的是,建模预测了几种受体的整合素结合增加,这些受体的信号传导在 CCl 暴露后已知在肝脏中增加。所提出的建模方法可能有助于阐明整合素受体与 ECM 蛋白在稳态和患病肝脏中的结合动力学。