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诺达病毒的研究进展

Advances in the study of nodavirus.

作者信息

Yong Chean Yeah, Yeap Swee Keong, Omar Abdul Rahman, Tan Wen Siang

机构信息

Institute of Bioscience, Universiti Putra Malaysia, Serdang, Selangor, Malaysia.

Xiamen University Malaysia, Sepang, Selangor, Malaysia.

出版信息

PeerJ. 2017 Sep 27;5:e3841. doi: 10.7717/peerj.3841. eCollection 2017.

Abstract

Nodaviruses are small bipartite RNA viruses which belong to the family of . They are categorized into alpha-nodavirus, which infects insects, and beta-nodavirus, which infects fishes. Another distinct group of nodavirus infects shrimps and prawns, which has been proposed to be categorized as gamma-nodavirus. Our current review focuses mainly on recent studies performed on nodaviruses. Nodavirus can be transmitted vertically and horizontally. Recent outbreaks have been reported in China, Indonesia, Singapore and India, affecting the aquaculture industry. It also decreased mullet stock in the Caspian Sea. Histopathology and transmission electron microscopy (TEM) are used to examine the presence of nodaviruses in infected fishes and prawns. For classification, virus isolation followed by nucleotide sequencing are required. In contrast to partial sequence identification, profiling the whole transcriptome using next generation sequencing (NGS) offers a more comprehensive comparison and characterization of the virus. For rapid diagnosis of nodavirus, assays targeting the viral RNA based on reverse-transcription PCR (RT-PCR) such as microfluidic chips, reverse-transcription loop-mediated isothermal amplification (RT-LAMP) and RT-LAMP coupled with lateral flow dipstick (RT-LAMP-LFD) have been developed. Besides viral RNA detections, diagnosis based on immunological assays such as enzyme-linked immunosorbent assay (ELISA), immunodot and Western blotting have also been reported. In addition, immune responses of fish and prawn are also discussed. Overall, in fish, innate immunity, cellular type I interferon immunity and humoral immunity cooperatively prevent nodavirus infections, whereas prawns and shrimps adopt different immune mechanisms against nodavirus infections, through upregulation of superoxide anion, prophenoloxidase, superoxide dismutase (SOD), crustin, peroxinectin, anti-lipopolysaccharides and heat shock proteins (HSP). Potential vaccines for fishes and prawns based on inactivated viruses, recombinant proteins or DNA, either delivered through injection, oral feeding or immersion, are also discussed in detail. Lastly, a comprehensive review on nodavirus virus-like particles (VLPs) is presented. In recent years, studies on prawn nodavirus are mainly focused on nodavirus (NV). Recombinant NV VLPs have been produced in prokaryotic and eukaryotic expression systems. Their roles as a nucleic acid delivery vehicle, a platform for vaccine development, a molecular tool for mechanism study and in solving the structures of NV are intensively discussed.

摘要

诺达病毒是小型双链RNA病毒,属于……科。它们分为感染昆虫的α-诺达病毒和感染鱼类的β-诺达病毒。另一类独特的诺达病毒感染虾类,有人提议将其归类为γ-诺达病毒。我们当前的综述主要关注对诺达病毒的最新研究。诺达病毒可垂直传播和水平传播。中国、印度尼西亚、新加坡和印度最近都报告了疫情爆发,影响了水产养殖业。它还导致里海鲻鱼数量减少。组织病理学和透射电子显微镜(TEM)用于检查受感染鱼类和虾中诺达病毒的存在。为了进行分类,需要先进行病毒分离,然后进行核苷酸测序。与部分序列鉴定相比,使用下一代测序(NGS)对整个转录组进行分析能对病毒进行更全面的比较和表征。为了快速诊断诺达病毒,已经开发了基于逆转录PCR(RT-PCR)针对病毒RNA的检测方法,如微流控芯片、逆转录环介导等温扩增(RT-LAMP)以及与侧流试纸条联用的RT-LAMP(RT-LAMP-LFD)。除了病毒RNA检测外,基于免疫分析的诊断方法,如酶联免疫吸附测定(ELISA)、免疫斑点法和蛋白质印迹法也有报道。此外,还讨论了鱼类和虾的免疫反应。总体而言,在鱼类中,先天免疫、细胞I型干扰素免疫和体液免疫协同预防诺达病毒感染,而虾类则通过上调超氧阴离子、前酚氧化酶、超氧化物歧化酶(SOD)、甲壳素、过氧化物酶、抗脂多糖和热休克蛋白(HSP)来采用不同的免疫机制抵抗诺达病毒感染。还详细讨论了基于灭活病毒、重组蛋白或DNA的鱼类和虾类潜在疫苗,这些疫苗可通过注射、口服或浸泡方式给药。最后,对诺达病毒病毒样颗粒(VLP)进行了全面综述。近年来,对虾诺达病毒的研究主要集中在诺达病毒(NV)上。重组NV VLP已在原核和真核表达系统中产生。它们作为核酸递送载体、疫苗开发平台、机制研究分子工具以及在解析NV结构方面的作用得到了深入讨论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cca3/5622607/49f73e12d798/peerj-05-3841-g001.jpg

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