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南极潮间带同域隐藏的自由生活线虫物种的鉴定。

The identification of sympatric cryptic free-living nematode species in the Antarctic intertidal.

作者信息

Lee Matthew R, Canales-Aguirre Cristian B, Nuñez Daniela, Pérez Karla, Hernández Crisitan E, Brante Antonio

机构信息

Centro i~mar, Universidad de Los Lagos, Puerto Montt, Chile.

Departamento de Ecología, Universidad Católica de la Santísima de Concepción, Concepción, Chile.

出版信息

PLoS One. 2017 Oct 5;12(10):e0186140. doi: 10.1371/journal.pone.0186140. eCollection 2017.

Abstract

The diversity of free-living nematodes in the beaches of two Antarctic islands, King George and Deception islands was investigated. We used morphological and molecular (LSU, and two fragments of SSU sequences) approaches to evaluate 236 nematodes. Specimens were assigned to at least genera using morphology and were assessed for the presence of cryptic speciation. The following genera were identified: Halomonhystera, Litoditis, Enoploides, Chromadorita, Theristus, Oncholaimus, Viscosia, Gammanema, Bathylaimus, Choanolaimus, and Paracanthonchus; along with specimens from the families Anticomidae and Linhomoeidae. Cryptic speciation was identified within the genera Halomonhystera and Litoditis. All of the cryptic species identified live sympatrically. The two cryptic species of Halomonhystera exhibited no significant morphological differences. However, Litoditis species 2 was significantly larger than Litoditis species 1. The utility of molecular data in confirming the identifications of some of the morphologically more challenging families of nematodes was demonstrated. In terms of which molecular sequences to use for the identification of free-living nematodes, the SSU sequences were more variable than the LSU sequences, and thus provided more resolution in the identification of cryptic speciation. Finally, despite the considerable amount of time and effort required to put together genetic and morphological data, the resulting advance in our understanding of diversity and ecology of free-living marine nematodes, makes that effort worthwhile.

摘要

对南极乔治王岛和欺骗岛两个岛屿海滩上自由生活的线虫多样性进行了调查。我们采用形态学和分子(大亚基核糖体RNA,以及小亚基核糖体RNA序列的两个片段)方法对236条线虫进行了评估。利用形态学将标本至少归类到属,并评估是否存在隐存种。鉴定出以下属:嗜盐单宫线虫属、细颈线虫属、裸口线虫属、色矛线虫属、瑟里斯线虫属、钩口线虫属、粘皮线虫属、伽马线虫属、深海线虫属、漏斗线虫属和副棘线虫属;以及来自反口线虫科和林氏线虫科的标本。在嗜盐单宫线虫属和细颈线虫属中发现了隐存种。所有鉴定出的隐存种都生活在同一区域。嗜盐单宫线虫属的两个隐存种在形态上没有显著差异。然而,细颈线虫属2号种明显大于细颈线虫属1号种。证明了分子数据在确认一些形态学上更具挑战性的线虫科鉴定中的作用。就用于鉴定自由生活线虫的分子序列而言,小亚基核糖体RNA序列比大亚基核糖体RNA序列更具变异性,因此在隐存种鉴定中提供了更高的分辨率。最后,尽管整合遗传和形态学数据需要大量的时间和精力,但由此在我们对自由生活海洋线虫的多样性和生态学理解方面取得的进展,使这些努力是值得的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc93/5629031/a68a6a2e406d/pone.0186140.g001.jpg

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