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利用中子散射和分子动力学模拟研究脯氨酸水溶液的动力学。

Investigation of the dynamics of aqueous proline solutions using neutron scattering and molecular dynamics simulations.

作者信息

Malo de Molina Paula, Alvarez Fernando, Frick Bernhard, Wildes Andrew, Arbe Arantxa, Colmenero Juan

机构信息

Centro de Física de Materiales (CFM) (CSIC-UPV/EHU) - Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain.

出版信息

Phys Chem Chem Phys. 2017 Oct 18;19(40):27739-27754. doi: 10.1039/c7cp05474b.

Abstract

We applied quasielastic neutron scattering (QENS) techniques to samples with two different contrasts (deuterated solute/hydrogenated solvent and the opposite label) to selectively study the component dynamics of proline/water solutions. Results on diluted and concentrated solutions (31 and 6 water molecules/proline molecule, respectively) were analyzed in terms of the susceptibility and considering a recently proposed model for water dynamics [Arbe et al., Phys. Rev. Lett., 2016, 117, 185501] which includes vibrations and the convolution of localized motions and diffusion. We found that proline molecules not only reduce the average diffusion coefficient of water but also extend the time/frequency range of the crossover region ('cage') between the vibrations and purely diffusive behavior. For the high proline concentration we also found experimental evidence of water heterogeneous dynamics and a distribution of diffusion coefficients. Complementary molecular dynamics simulations show that water molecules start to perform rotational diffusion when they escape the cage regime but before the purely diffusive behavior is established. The rotational diffusion regime is also retarded by the presence of proline molecules. On the other hand, a strong coupling between proline and water diffusive dynamics which persists with decreasing temperature is directly observed using QENS. Not only are the temperature dependences of the diffusion coefficients of both components the same, but their absolute values also approach each other with increasing proline concentration. We compared our results with those reported using other techniques, in particular using dielectric spectroscopy (DS). A simple approach based on molecular hydrodynamics and a molecular treatment of DS allows rationalizing the a priori puzzling inconsistency between QENS and dielectric results regarding the dynamic coupling of the two components. The interpretation proposed is based on general grounds and therefore should be applicable to other biomolecular solutions.

摘要

我们将准弹性中子散射(QENS)技术应用于具有两种不同对比(氘代溶质/氢化溶剂以及相反的标记)的样品,以选择性地研究脯氨酸/水溶液的组分动力学。根据磁化率对稀释溶液和浓缩溶液(分别为31个和6个水分子/脯氨酸分子)的结果进行了分析,并考虑了最近提出的水动力学模型[阿尔贝等人,《物理评论快报》,2016年,第117卷,第185501页],该模型包括振动以及局域运动和扩散的卷积。我们发现脯氨酸分子不仅降低了水的平均扩散系数,还扩展了振动与纯扩散行为之间交叉区域(“笼”)的时间/频率范围。对于高脯氨酸浓度,我们还发现了水的非均匀动力学和扩散系数分布的实验证据。互补的分子动力学模拟表明,水分子在逃离笼状区域但在建立纯扩散行为之前开始进行旋转扩散。脯氨酸分子的存在也会阻碍旋转扩散区域。另一方面,使用QENS直接观察到脯氨酸与水的扩散动力学之间存在强耦合,且这种耦合随着温度降低而持续。不仅两种组分的扩散系数的温度依赖性相同,而且它们的绝对值也随着脯氨酸浓度的增加而相互接近。我们将我们的结果与使用其他技术(特别是介电谱(DS))报道的结果进行了比较。一种基于分子流体动力学和DS分子处理的简单方法能够合理解释QENS和介电结果之间关于两种组分动态耦合的先验令人困惑的不一致性。所提出的解释基于一般原理,因此应该适用于其他生物分子溶液。

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