Peter Linder H, Bouchenak-Khelladi Yanis
Institute of Systematic and Evolutionary Botany, University of Zurich, Zollikerstrasse 107, Zurich 8008, Switzerland.
Institute of Systematic and Evolutionary Botany, University of Zurich, Zollikerstrasse 107, Zurich 8008, Switzerland.
Mol Phylogenet Evol. 2017 Dec;117:179-190. doi: 10.1016/j.ympev.2017.10.003. Epub 2017 Oct 5.
Although much of extant diversity is probably the product of evolutionary radiations, the special case of adaptive radiations has not yet been thoroughly explored. Adaptive radiations are postulated to occur when a lineage is exposed to new ecological opportunities, where it can diversify ecologically. We argue that adaptive radiations have two characteristics. Firstly, the diversification rate accelerates initially, and is then followed by a density-dependent slow-down. Secondly, traits relevant to the new ecological opportunity should evolve at or just before the radiation. We also argue that a correct identification of adaptive radiations is dependent on the phylogenies underlying the diversification dynamics being sampled adequately (i.e. comprehensive species sampling), and that the traits should be treated continuously if they exhibit a biological continuum and not be over-simplified into binary traits. Here, we test the hypothesis that much of the extant diversity of the south-temperate grass subfamily Danthonioideae is the result of two geographically separated but contemporaneous adaptive radiations, in response to Late-Miocene-Pliocene aridification and increasingly seasonal climates. We show that both Pentameris (83 African species) and Rytidosperma (73 Australasian-South American species) exhibit accelerations in diversification rates followed by linear density-dependent declines. We also show that two selected traits show differential evolutionary regimes with different evolutionary optima, and that these are linked to changes in the diversification rate. These results are consistent with these being adaptive, and putatively parallel, radiations. However, by mapping traits over the whole danthonioid phylogeny, it is evident that no identified trait or trait combination is sufficient and necessary for adaptive radiations. Furthermore, we show that simplifying the traits to binary gives a strong but potentially erroneous link between trait shift and diversification rate shift.
尽管现存的许多多样性可能是进化辐射的产物,但适应性辐射这种特殊情况尚未得到充分探索。据推测,当一个谱系面临新的生态机遇并能在生态上实现多样化时,适应性辐射就会发生。我们认为适应性辐射有两个特征。其一,多样化速率最初会加速,随后会出现密度依赖型的减缓。其二,与新生态机遇相关的性状应在辐射发生时或辐射发生之前就开始进化。我们还认为,正确识别适应性辐射依赖于对多样化动态背后的系统发育进行充分采样(即全面的物种采样),并且如果性状表现出生物学上的连续性,就应将其作为连续性状来处理,而不应过度简化为二元性状。在此,我们检验这样一个假设:南温带禾本科鸭茅亚科现存的许多多样性是两次地理上分离但同时期的适应性辐射的结果,这两次辐射是对晚中新世至上新世干旱化以及日益季节性的气候的响应。我们发现,Pentameris属(83个非洲物种)和Rytidosperma属(73个澳大拉西亚 - 南美洲物种)的多样化速率都出现了加速,随后是线性的密度依赖型下降。我们还表明,两个选定的性状表现出具有不同进化最优值的不同进化模式,并且这些模式与多样化速率的变化相关。这些结果与它们是适应性辐射且可能是平行辐射的观点一致。然而,通过在整个鸭茅亚科系统发育树上绘制性状图谱,很明显,没有任何已识别的性状或性状组合对于适应性辐射是充分且必要的。此外,我们表明将性状简化为二元性状会在性状转变和多样化速率转变之间产生一个强有力但可能错误的联系。