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利用基质辅助激光解吸电离飞行时间质谱快速检测热带假丝酵母对氟康唑的耐药性

Rapid detection of fluconazole resistance in Candida tropicalis by MALDI-TOF MS.

作者信息

Paul Saikat, Singh Pankaj, A S Shamanth, Rudramurthy Shivaprakash M, Chakrabarti Arunaloke, Ghosh Anup K

机构信息

Department of Medical Microbiology, Postgraduate Institute of Medical Education and Research (PGIMER), Chandigarh 160012, India.

出版信息

Med Mycol. 2018 Feb 1;56(2):234-241. doi: 10.1093/mmy/myx042.

Abstract

With the changing epidemiology and emergence of antifungal resistance among Candida species, rapid antifungal susceptibility testing (AFST) is crucial for optimization of antifungal therapy. This study was conducted to standardize a matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI -TOF MS) based AFST method (ms-AFST) for susceptibility of Candida tropicalis isolates. Clinical isolates of C. tropicalis were confirmed for fluconazole resistance by the CLSI (M27-A3) method. The incubation period and drug concentration were optimized to determine the minimal profile change concentration (MPCC) by MALDI-TOF MS. The data were analyzed first by direct visual observation of the spectra followed by composite correlation index (CCI) matrix analysis, virtual gel analysis, and cluster analysis for confirmation. Finally, the correlation between minimum inhibitory concentrations (MICs) and MPCCs was evaluated. A total of 15 fluconazole resistant (MICs ranging from 16 to 128 μg/ml) and 19 fluconazole susceptible C. tropicalis isolates (MIC ≤1 μg/ml) were included in this study. All C. tropicalis isolates had significant spectral changes after 4h incubation with fluconazole. Of 34 isolates, MPCCs and MICs were equivalent for 16 isolates, and the MPCC was one dilution lower than the respective MIC in the remaining 18 isolates. This finding was further supported by visual analysis, CCI matrix analysis, virtual gel and principal component analysis dendrogram analysis. The correlation between MPCC and MIC was significant (P < .05). Therefore, a MALDI-TOF MS based AFST assay may be used as a rapid screening technique for fluconazole resistance in C. tropicalis.

摘要

随着念珠菌属真菌流行病学的变化以及抗真菌耐药性的出现,快速抗真菌药敏试验(AFST)对于优化抗真菌治疗至关重要。本研究旨在标准化一种基于基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)的热带念珠菌分离株药敏试验方法(ms-AFST)。通过CLSI(M27-A3)方法确认热带念珠菌临床分离株对氟康唑的耐药性。优化孵育时间和药物浓度,以通过MALDI-TOF MS确定最小谱图变化浓度(MPCC)。首先通过直接观察光谱进行数据分析,随后进行复合相关指数(CCI)矩阵分析、虚拟凝胶分析和聚类分析以进行确认。最后,评估最低抑菌浓度(MIC)与MPCC之间的相关性。本研究共纳入15株对氟康唑耐药(MIC范围为16至128μg/ml)和19株对氟康唑敏感的热带念珠菌分离株(MIC≤1μg/ml)。所有热带念珠菌分离株在与氟康唑孵育4小时后均有明显的光谱变化。在34株分离株中,16株的MPCC与MIC相当,其余18株的MPCC比各自的MIC低一个稀释度。这一发现得到了视觉分析、CCI矩阵分析、虚拟凝胶和主成分分析树状图分析的进一步支持。MPCC与MIC之间的相关性显著(P<.05)。因此,基于MALDI-TOF MS的AFST检测可作为热带念珠菌氟康唑耐药性的快速筛选技术。

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