Department of Biomedical Sciences, Institute of Tropical Medicine, Nationalestraat 155, 2000, Antwerp, Belgium.
Parasit Vectors. 2017 Oct 10;10(1):468. doi: 10.1186/s13071-017-2406-z.
Recent whole genome sequencing (WGS) analysis identified a viable triploid strain of Trypanosoma congolense. This triploid strain BANANCL2 was a clone of the field isolate BANAN/83/CRTRA/64 that was collected from cattle in Burkina Faso in 1983.
We demonstrated the viability and stability of triploidy throughout the complete life-cycle of the parasite by infecting tsetse flies with the triploid clone BANANCL2. Proboscis-positive tsetse flies efficiently transmitted the parasites to mice resulting in systemic infections. WGS of the parasites was performed at all life-cycle stages, and a method based on a block alternative allele frequency spectrum was developed to efficiently detect the ploidy profiles of samples with low read depth. This approach confirmed the triploid profile of parasites throughout their life-cycle in the tsetse fly and the mammalian host, demonstrating that triploidy is present at all stages and is stable over time.
The presence of viable field-isolated triploid parasites indicates another possible layer of genetic diversity in natural T. congolense populations. The comparison between triploid and diploid parasites provides a unique model system to study the impact of chromosome copy number variations in African trypanosomes. In addition, the consequences of triploidy can be further investigated using this stable triploid model.
最近的全基因组测序(WGS)分析鉴定了一种可行的锥虫属刚果种三倍体菌株。该三倍体菌株 BANANCL2 是 1983 年从布基纳法索牛中采集的田间分离株 BANAN/83/CRTRA/64 的克隆。
我们通过用三倍体克隆 BANANCL2 感染采采蝇,证明了寄生虫整个生命周期中三倍体的生存能力和稳定性。带有长喙的采采蝇有效地将寄生虫传播给小鼠,导致全身感染。对寄生虫的所有生命周期阶段都进行了 WGS 分析,并开发了一种基于块替代等位基因频率谱的方法,以有效地检测低读深度样本的倍性谱。该方法证实了寄生虫在采采蝇和哺乳动物宿主整个生命周期中的三倍体特征,表明三倍体在所有阶段都存在且随时间稳定。
可行的野外分离三倍体寄生虫的存在表明,在天然锥虫属刚果种群体中存在另一种可能的遗传多样性层。三倍体和二倍体寄生虫之间的比较为研究非洲锥虫染色体拷贝数变异的影响提供了一个独特的模型系统。此外,还可以使用这种稳定的三倍体模型进一步研究三倍体的后果。