Du Yaping, Liu Xiupian, Lai Qiliang, Li Weiwei, Sun Fengqin, Shao Zongze
State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA; Fujian Collaborative Innovation Center for Exploitation and Utilization of Marine Biological Resources; Fujian Key Laboratory of Marine Genetic Resources, Xiamen 361005, PR China.
Int J Syst Evol Microbiol. 2017 Nov;67(11):4842-4845. doi: 10.1099/ijsem.0.002388. Epub 2017 Oct 12.
A taxonomic study was carried out on strain L54-1-50, which was isolated from surface seawater of the South China Sea. Cells of strain L54-1-50 were Gram-stain-negative, rod-shaped, oxidase-positive and catalase-positive. Growth was observed at salinities from 0 to 9 % (optimum 2 %, w/v), at pH 6.0-10.0 (optimum 8.0-9.0) and at temperatures from 10 to 45 °C (optimum 25-37 °C), but not at 4 or 50 °C. The 16S rRNA gene sequence analysis indicated that strain L54-1-50 was a member of the genus Oceanibaculum, related to Oceanibaculum indicum P24 (98.8 %) and Oceanibaculum pacificum MC2UP-L3 (97.7 %). The digital DNA-DNA hybridization values between strain L54-1-50 and the two type strains O. indicum P24 and O. pacificum MC2UP-L3 were 35.4±2.5 and 23.7±2.5 %, respectively. The average nucleotide identity values between strain L54-1-50 and two type strains were 79.7 and 88.3 %, respectively. The major cellular fatty acids were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c), C16 : 0 and C18 : 1 2-OH. The respiratory quinone was Q-10. The polar lipids comprised diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, phosphatidylglycerol, two unidentified phospholipids and three unidentified lipids. The G+C content of the chromosomal DNA was 65.1 mol%. The combined genotypic and phenotypic data showed that strain L54-1-50 represents a novel species of the genus Oceanibaculum, for which the name Oceanibaculumnanhaiense sp. nov. is proposed, with the type strain L54-1-50 (=KCTC 52312=MCCC 1A05150).
对从中国南海表层海水中分离得到的菌株L54-1-50进行了分类学研究。菌株L54-1-50的细胞革兰氏染色阴性,呈杆状,氧化酶阳性,过氧化氢酶阳性。在盐度0至9%(最适2%,w/v)、pH值6.0至10.0(最适8.0至9.0)以及温度10至45 °C(最适25至37 °C)条件下可观察到生长,但在4或50 °C时不生长。16S rRNA基因序列分析表明,菌株L54-1-50是海洋芽孢杆菌属的成员,与印度洋海洋芽孢杆菌P24(98.8%)和太平洋海洋芽孢杆菌MC2UP-L3(97.7%)相关。菌株L54-1-50与两个模式菌株印度洋海洋芽孢杆菌P24和太平洋海洋芽孢杆菌MC2UP-L3之间的数字DNA-DNA杂交值分别为35.4±2.5%和23.7±2.5%。菌株L54-1-50与两个模式菌株之间的平均核苷酸同一性值分别为79.7%和88.3%。主要细胞脂肪酸为总和特征8(C18 : 1ω7c和/或C18 : 1ω6c)、C16 : 0和C18 : 1 2-OH。呼吸醌为Q-10。极性脂质包括双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰单甲基乙醇胺、磷脂酰甘油、两种未鉴定的磷脂和三种未鉴定的脂质。染色体DNA的G+C含量为65.1 mol%。综合的基因型和表型数据表明,菌株L54-1-50代表海洋芽孢杆菌属的一个新物种,为此提出名称南海海洋芽孢杆菌(Oceanibaculumnanhaiense sp. nov.),模式菌株为L54-1-50(=KCTC 52312=MCCC 1A05150)。