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结核分枝杆菌的转录调节因子LysG(Rv1985c)以赖氨酸依赖的方式激活lysE(Rv1986)。

The transcriptional regulator LysG (Rv1985c) of Mycobacterium tuberculosis activates lysE (Rv1986) in a lysine-dependent manner.

作者信息

Schneefeld Marie, Busche Tobias, Geffers Robert, Kalinowski Jörn, Bange Franz-Christoph

机构信息

Department of Medical Microbiology and Hospital Epidemiology, Hannover Medical School, Hannover, Germany.

Microbial Genomics and Biotechnology, Center for Biotechnology, Bielefeld University, Bielefeld, Germany.

出版信息

PLoS One. 2017 Oct 19;12(10):e0186505. doi: 10.1371/journal.pone.0186505. eCollection 2017.

Abstract

The Mycobacterium tuberculosis protein encoded by the Rv1986 gene is a target for memory T cells in patients with tuberculosis, and shows strong similarities to a lysine exporter LysE of Corynebacterium glutamicum. During infection, the pathogen Mycobacterium tuberculosis adapts its metabolism to environmental changes. In this study, we found that the expression of Rv1986 is controlled by Rv1985c. Rv1985c is located directly upstream of Rv1986 with an overlapping promoter region between both genes. Semiquantitative reverse transcription PCR using an isogenic mutant of Mycobacterium tuberculosis lacking Rv1985c showed that in the presence of lysine, Rv1985c protein positively upregulated the expression of Rv1986. RNA sequencing revealed the transcription start points for both transcripts and overlapping promoters. An inverted repeat in the center of the intergenic region was identified, and binding of Rv1985c protein to the intergenic region was confirmed by electrophoretic mobility shift assays. Whole transcriptome expression analysis and RNAsequencing showed downregulated transcription of ppsBCD in the Rv1985c-mutant compared to the wild type strain. Taken together, our findings characterize the regulatory network of Rv1985c in Mycobacterium tuberculosis. Due to their similarity of an orthologous gene pair in Corynebacterium glutamicum, we suggest to rename Rv1985c to lysG(Mt), and Rv1986 to lysE(Mt).

摘要

由Rv1986基因编码的结核分枝杆菌蛋白是结核病患者记忆T细胞的一个靶点,并且与谷氨酸棒杆菌的赖氨酸转运蛋白LysE有很强的相似性。在感染过程中,病原体结核分枝杆菌会使其代谢适应环境变化。在本研究中,我们发现Rv1986的表达受Rv1985c调控。Rv1985c直接位于Rv1986上游,两个基因之间有重叠的启动子区域。使用缺乏Rv1985c的结核分枝杆菌同基因突变体进行的半定量逆转录PCR表明,在赖氨酸存在的情况下,Rv1985c蛋白正向上调Rv1986的表达。RNA测序揭示了两个转录本的转录起始点和重叠启动子。在基因间区域的中心鉴定出一个反向重复序列,并且通过电泳迁移率变动分析证实了Rv1985c蛋白与基因间区域的结合。与野生型菌株相比,全转录组表达分析和RNA测序显示Rv1985c突变体中ppsBCD的转录下调。综上所述,我们的研究结果描述了结核分枝杆菌中Rv1985c的调控网络。由于它们与谷氨酸棒杆菌中的一对直系同源基因相似,我们建议将Rv1985c重命名为lysG(Mt),将Rv1986重命名为lysE(Mt)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e11/5648196/4aa01eb74280/pone.0186505.g001.jpg

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