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珍珠粟霜霉病病原菌的基因组序列草图

Draft genome sequence of , the pearl millet downy mildew pathogen.

作者信息

Nayaka S Chandra, Shetty H Shekar, Satyavathi C Tara, Yadav Rattan S, Kishor P B Kavi, Nagaraju M, Anoop T A, Kumar M Milner, Kuriakose Boney, Chakravartty Navajeet, Katta A V S K Mohan, Lachagari V B Reddy, Singh Om Vir, Sahu Pranav Pankaj, Puranik Swati, Kaushal Pankaj, Srivastava Rakesh K

机构信息

Downy Mildew Research Laboratory, DOS in Biotechnology, University of Mysore, Mysuru, Karnataka, India.

PC Unit ARS Mandore, Jodhpur, Rajasthan, India.

出版信息

Biotechnol Rep (Amst). 2017 Aug 24;16:18-20. doi: 10.1016/j.btre.2017.07.006. eCollection 2017 Dec.

DOI:10.1016/j.btre.2017.07.006
PMID:29062722
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5647520/
Abstract

pathogen is the most important biotic production constraints of pearl millet in India, Africa and other parts of the world. We report a whole genome assembly and analysis of pathotype 1, one of the most virulent pathotypes of from India. The draft genome assembly contained 299,901,251 bp with 65,404 genes. This study may help understand the evolutionary pattern of pathogen and aid elucidation of effector evolution for devising effective durable resistance breeding strategies in pearl millet.

摘要

病原菌是印度、非洲和世界其他地区珍珠粟最重要的生物产量限制因素。我们报告了来自印度的最具毒性的致病型之一致病型1的全基因组组装和分析。基因组组装草图包含299,901,251个碱基对，有65,404个基因。这项研究可能有助于了解病原菌的进化模式，并有助于阐明效应子的进化，以便在珍珠粟中设计有效的持久抗性育种策略。