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口腔鳞状细胞癌中ARID2基因突变的分析

Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma.

作者信息

Das Lakshmi Prabha, Pitty Raghuram Hari, Asokan Kannan, C L Krithika, M S Anandi, Ramanathan Arvind

机构信息

Department of Oral Medicine and Radiology, SRM Dental College, Ramapuram, Chennai, India.Email:

出版信息

Asian Pac J Cancer Prev. 2017 Oct 26;18(10):2679-2681. doi: 10.22034/APJCP.2017.18.10.2679.

Abstract

Background: The ARID2 gene, encoding a sub unit of the chromatin remodelling complex, has a possible tumour suppressor function and has been found to be frequently mutated in various tumours, including gingivo buccal oral squamous cell carcinomas. The present study was designed to analyse the presence of ARID2 gene mutations in the distinct genetic South Indian (Dravidian) population. Materials and Methods: Genomic DNA from thirty biopsy tissue samples of histopathologically confirmed cases of oral squamous cell carcinoma (OSCC) were subjected to PCR amplification with intronic primers encompassing exons 19 and 20 of ARID2. Subsequently, the PCR amplicons were purified and subjected to Sanger sequencing using forward primers for analysis of mutational status. Results: Our study yielded a 6% occurrence of mutations in the ARID2 gene among the thirty OSCC samples. Two samples showed a C(5174)A nonsense mutation whereby the “C” nucleotide was substituted with an “A” nucleotide at position 5174, resulting in the conversion of serine amino acid at codon 1725 to a premature STOP codon. Conclusion: Identification of ARID2 gene mutations in OSCCs in this distinct ethnic population reaffirms that aberrations in the chromatin remodelling complex could indeed also contribute to tumorigenesis, thus providing new insights for future research.

摘要

背景

ARID2基因编码染色质重塑复合体的一个亚基,具有潜在的肿瘤抑制功能,并且已发现在包括牙龈颊部口腔鳞状细胞癌在内的各种肿瘤中频繁发生突变。本研究旨在分析不同遗传背景的南印度(达罗毗荼)人群中ARID2基因突变的情况。材料与方法:对30例经组织病理学确诊的口腔鳞状细胞癌(OSCC)活检组织样本的基因组DNA,使用包含ARID2基因第19和20外显子的内含子引物进行PCR扩增。随后,对PCR扩增产物进行纯化,并使用正向引物进行桑格测序以分析突变状态。结果:我们的研究在30个OSCC样本中发现ARID2基因的突变发生率为6%。两个样本显示出C(5174)A无义突变,即第5174位的“C”核苷酸被“A”核苷酸取代,导致密码子1725处的丝氨酸氨基酸转换为提前终止密码子。结论:在这个独特的种族人群的OSCC中鉴定出ARID2基因突变,再次证实染色质重塑复合体的异常确实也可能导致肿瘤发生,从而为未来的研究提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62b0/5747389/b63df40ce5fe/APJCP-18-2679-g001.jpg

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