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High-quality draft assemblies of mammalian genomes from massively parallel sequence data.利用大规模平行测序数据生成高质量的哺乳动物基因组草图组装。
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Scaffolding pre-assembled contigs using SSPACE.使用 SSPACE 搭建预组装 contigs 的支架。
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The Dunaliella salina organelle genomes: large sequences, inflated with intronic and intergenic DNA.盐生杜氏藻细胞器基因组：大片段序列，内含子和基因间 DNA 膨胀。
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5
Osmotic responses of Dunaliella to the changes of salinity.杜氏盐藻对盐度变化的渗透反应。
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Osmotic regulation of photosynthetic glycerol production in Dunaliella.杜氏盐藻中光合甘油产生的渗透调节
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嗜盐且积累β-胡萝卜素的绿藻菌株CCAP19/18的核基因组序列草图

Draft Nuclear Genome Sequence of the Halophilic and Beta-Carotene-Accumulating Green Alga Strain CCAP19/18.

作者信息

Polle Juergen E W, Barry Kerrie, Cushman John, Schmutz Jeremy, Tran Duc, Hathwaik Leyla T, Yim Won C, Jenkins Jerry, McKie-Krisberg Zaid, Prochnik Simon, Lindquist Erika, Dockter Rhyan B, Adam Catherine, Molina Henrik, Bunkenborg Jakob, Jin EonSeon, Buchheim Mark, Magnuson Jon

机构信息

Department of Biology, Brooklyn College of the City University of New York, Brooklyn, New York, USA

The Graduate Center of the City University of New York, New York, New York, USA.

出版信息

Genome Announc. 2017 Oct 26;5(43):e01105-17. doi: 10.1128/genomeA.01105-17.

DOI:10.1128/genomeA.01105-17
PMID:29074648
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5658486/
Abstract

The halotolerant alga is a model for stress tolerance and is used commercially for production of beta-carotene (=pro-vitamin A). The presented draft genome of the genuine strain CCAP19/18 will allow investigations into metabolic processes involved in regulation of stress responses, including carotenogenesis and adaptations to life in high-salinity environments.

摘要

耐盐藻类是耐胁迫的模型，在商业上用于生产β-胡萝卜素（=维生素A原）。所展示的正宗菌株CCAP19/18的基因组草图将有助于研究参与应激反应调节的代谢过程，包括类胡萝卜素生成以及对高盐环境生活的适应性。