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Universality and Specificity in Protein Fluctuation Dynamics.

作者信息

Copperman J, Dinpajooh M, Beyerle E R, Guenza M G

机构信息

Department of Physics, University of Oregon, Eugene, Oregon 97403, USA.

Department of Chemistry and Institute of Theoretical Science, University of Oregon, Eugene, Oregon 97403, USA.

出版信息

Phys Rev Lett. 2017 Oct 13;119(15):158101. doi: 10.1103/PhysRevLett.119.158101. Epub 2017 Oct 11.

Abstract

We investigate the universal scaling of protein fluctuation dynamics with a site-specific diffusive model of protein motion, which predicts an initial subdiffusive regime in the configurational relaxation. The long-time dynamics of proteins is controlled by an activated regime. We argue that the hierarchical free energy barriers set the time scales of biological processes and establish an upper limit to the size of single protein domains. We find it compelling that the scaling behavior for the protein dynamics is in close agreement with the Kardar-Parisi-Zhang scaling exponents.

摘要

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