Bouvier Benjamin, Cézard Christine
Laboratoire de Glycochimie, des Antimicrobiens et des Agroressources, CNRS UMR7378/Université de Picardie Jules Verne, 10 rue Baudelocque, 80039 Amiens Cedex, France.
Phys Chem Chem Phys. 2017 Nov 8;19(43):29498-29507. doi: 10.1039/c7cp04529h.
Pyoverdines, the primary siderophores of Pseudomonas bacteria, scavenge the iron essential to bacterial life in the outside medium and transport it back into the periplasm. Despite their relative simplicity, pyoverdines feature remarkably flexible recognition characteristics whose origins at the atomistic level remain only partially understood: the ability to bind other metals than ferric iron, the capacity of outer membrane transporters to recognize and internalize noncognate pyoverdines from other pseudomonads… One of the less examined factors behind this polymorphic recognition lies in the ability for pyoverdines to bind iron with two distinct chiralities, at the cost of a conformational switch. Herein, we use free energy simulations to study how the stereochemistry of the iron chelating groups influences the structure and dynamics of two common pyoverdines and impacts their recognition by the FpvA membrane transporter of P. aeruginosa. We show that conformational preferences for one metal binding chirality over the other, observed in solution depending on the nature of the pyoverdine, are canceled out by the FpvA transporter, which recognizes both chiralities equally well for both pyoverdines under study. However, FpvA discriminates between pyoverdines by altering the kinetics of stereoisomer interconversion. We present structural causes of this intriguing recognition mechanism and discuss its possible significance in the context of the competitive scavenging of iron.
绿脓菌素是假单胞菌属细菌的主要铁载体,它在外部培养基中摄取细菌生存所必需的铁,并将其转运回周质。尽管绿脓菌素相对简单,但其具有非常灵活的识别特性,其原子水平的起源仍仅部分为人所知:它能够结合除三价铁以外的其他金属,外膜转运蛋白能够识别并内化来自其他假单胞菌的非同源绿脓菌素……这种多态识别背后较少被研究的因素之一在于绿脓菌素能够以两种不同的手性结合铁,但要以构象转换为代价。在此,我们使用自由能模拟来研究铁螯合基团的立体化学如何影响两种常见绿脓菌素的结构和动力学,并影响它们被铜绿假单胞菌的FpvA膜转运蛋白识别。我们表明,在溶液中观察到的一种金属结合手性相对于另一种的构象偏好,被FpvA转运蛋白消除,该转运蛋白对所研究的两种绿脓菌素的两种手性识别效果相同。然而,FpvA通过改变立体异构体相互转化的动力学来区分绿脓菌素。我们提出了这种有趣的识别机制的结构原因,并讨论了其在铁的竞争性摄取背景下的可能意义。