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与最大自主通气相关的遗传变异的全基因组关联研究揭示了两个与肺功能相关的新基因组信号。

Genome-wide association study for genetic variants related with maximal voluntary ventilation reveals two novel genomic signals associated with lung function.

作者信息

Suh Yujin, Lee Chaeyoung

机构信息

Department of Bioinformatics and Life Science, Soongsil University, Seoul, Korea.

出版信息

Medicine (Baltimore). 2017 Nov;96(44):e8530. doi: 10.1097/MD.0000000000008530.

Abstract

Genome-wide association studies (GWAS) for spirometry parameters have been limited to forced vital capacity (FVC), forced expiratory volume in 1 second (FEV1), and their ratio. This study examined to identify genetic variants associated with maximal voluntary ventilation (MVV), an important spirometry parameter presenting inspiratory muscle strength.A total of 8842 Korean subjects participated in the Korean Association REsource Consortium were used to identify nucleotide variants associated with MVV and other spirometry parameters through a GWAS. Genetic associations were determined by employing a mixed model that can control background polygenic effects.The analysis revealed 3 nucleotide variants associated with MVV (P < 5 × 10). One (rs1496255) was also associated with FVC and FEV1. The other 2 variants were identified only for MVV and located in the genes of LOC102724340 (rs41434646) and FHIT (rs9833533). In particular, FHIT represses transcriptional activity of β-catenin, a critical protein for growth of skeletal muscle, and thus might have influenced the level of MVV.The current study revealed 2 novel nucleotide variants as genetic association signals for MVV. The association signals were suggested specific for neuromuscular diseases with a restrictive ventilatory impairment. Further studies are required to understand underlying mechanisms for their influence to restrictive lung diseases.

摘要

肺活量测定参数的全基因组关联研究(GWAS)一直局限于用力肺活量(FVC)、一秒用力呼气量(FEV1)及其比值。本研究旨在确定与最大自主通气量(MVV)相关的基因变异,MVV是一项反映吸气肌力量的重要肺活量测定参数。共有8842名韩国受试者参与了韩国协会资源联盟,通过GWAS来确定与MVV及其他肺活量测定参数相关的核苷酸变异。采用能够控制背景多基因效应的混合模型来确定基因关联。分析发现3个与MVV相关的核苷酸变异(P<5×10)。其中一个(rs1496255)也与FVC和FEV1相关。另外2个变异仅在MVV中被发现,分别位于LOC102724340基因(rs41434646)和FHIT基因(rs9833533)中。特别是,FHIT可抑制β-连环蛋白的转录活性,β-连环蛋白是骨骼肌生长的关键蛋白,因此可能影响了MVV的水平。本研究发现了2个新的核苷酸变异作为MVV的基因关联信号。这些关联信号提示对具有限制性通气功能障碍的神经肌肉疾病具有特异性。需要进一步研究以了解它们影响限制性肺病的潜在机制。

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