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本文引用的文献

1
Insights into aureocin A70 regulation: participation of regulator AurR, alternative transcription factor σ(B) and phage ϕ11 regulator cI.对金黄霉素A70调控的见解:调控因子AurR、替代转录因子σ(B)和噬菌体ϕ11调控因子cI的参与
Res Microbiol. 2016 Feb-Mar;167(2):90-102. doi: 10.1016/j.resmic.2015.10.004. Epub 2015 Oct 29.
2
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.A5-miseq:一种用于从Illumina MiSeq数据组装微生物基因组的更新流程。
Bioinformatics. 2015 Feb 15;31(4):587-9. doi: 10.1093/bioinformatics/btu661. Epub 2014 Oct 22.
3
The gene cluster of aureocyclicin 4185: the first cyclic bacteriocin of Staphylococcus aureus.金核菌素 4185 的基因簇:金黄色葡萄球菌中第一个环状细菌素。
Microbiology (Reading). 2014 May;160(Pt 5):917-928. doi: 10.1099/mic.0.075689-0. Epub 2014 Feb 26.
4
PHAST: a fast phage search tool.PHAST:一种快速噬菌体搜索工具。
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W347-52. doi: 10.1093/nar/gkr485. Epub 2011 Jun 14.
5
Aureocins 4185, bacteriocins produced by Staphylococcus aureus 4185: potential application in food preservation.金葡菌素 4185,金黄色葡萄球菌 4185 产生的细菌素:在食品保鲜中的潜在应用。
Foodborne Pathog Dis. 2010 Oct;7(10):1255-62. doi: 10.1089/fpd.2010.0578.
6
BACTIBASE second release: a database and tool platform for bacteriocin characterization.BACTIBASE 第二版:细菌素特征描述的数据库和工具平台。
BMC Microbiol. 2010 Jan 27;10:22. doi: 10.1186/1471-2180-10-22.
7
Bacteriocin production by Staphylococcus aureus involved in bovine mastitis in Brazil.巴西奶牛乳腺炎相关金黄色葡萄球菌的细菌素产生。
Res Microbiol. 2009 Oct;160(8):592-9. doi: 10.1016/j.resmic.2009.07.007. Epub 2009 Jul 25.
8
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.

产金环霉素4185的菌株4185的基因组序列草图

Draft Genome Sequence of 4185, a Strain That Produces Aureocyclicin 4185.

作者信息

Francisco Márcia Silva, Farias Felipe Miceli, Santos Ilana Nascimento Sousa, Marques-Bastos Selda Loase Salustiano, Albano Rodolpho Mattos, Bastos Maria do Carmo Freire

机构信息

Departamento de Microbiologia Geral, Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brasil.

Departamento de Bioquímica, Instituto de Biologia Roberto Alcântara Gomes, Universidade do Estado do Rio de Janeiro, Rio de Janeiro, Brasil.

出版信息

Genome Announc. 2017 Nov 2;5(44):e01249-17. doi: 10.1128/genomeA.01249-17.

DOI:10.1128/genomeA.01249-17
PMID:29097478
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5668554/
Abstract

The draft genome sequence of the aureocyclicin 4185-producing strain 4185 is presented. The assembly contains 2,789,721 bp and a G+C content of 32.8%. Genome analysis allowed us to determine the complete sequence of the bacteriocinogenic plasmid pRJ101 and to find another bacteriocin gene cluster encoded on the bacterial chromosome.

摘要

本文展示了产金环霉素4185的菌株4185的基因组序列草图。该组装序列包含2,789,721个碱基对,G+C含量为32.8%。基因组分析使我们能够确定产细菌素质粒pRJ101的完整序列,并发现细菌染色体上编码的另一个细菌素基因簇。