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1847年在北婆罗洲沙巴的菲佛陆生蜗牛(新腹足目:环口螺科):分子系统发育与壳形地理变异分析

Land snails of Pfeiffer, 1847 in Sabah, Northern Borneo (Caenogastropoda: Cyclophoridae): an analysis of molecular phylogeny and geographical variations in shell form.

作者信息

Phung Chee-Chean, Heng Pooi-San, Liew Thor-Seng

机构信息

Institute for Tropical Biology and Conservation, Universiti Malaysia Sabah, Kota Kinabalu, Sabah, Malaysia.

出版信息

PeerJ. 2017 Oct 31;5:e3981. doi: 10.7717/peerj.3981. eCollection 2017.

Abstract

is a species rich genus with approximately 100 species documented. Species-level identification in this group has been based on shell morphology and colouration, as well as some anatomical features based on small sample sizes. However, the implications of the inter- and intra-species variations in shell form to the taxonomy of species and the congruency of its current shell based taxonomy with its molecular phylogeny are still unclear. There are four species found in Sabah, Borneo, and their taxonomy status remains uncertain due to substantial variation in shell forms. This study focuses on the phylogenetic relationships and geographical variation in shell form of three species from Sabah. The phylogenetic relationship of these species was first estimated by performing Maximum Likelihood and Bayesian analysis based on mitochondrial genes (16S rDNA and COI) and nuclear gene (ITS-1). Then, a total of six quantitative shell characters (i.e., shell height, shell width, aperture height, aperture width, shell spire height, and ratio of shell height to width) and three qualitative shell characters (i.e., shell colour patterns, spiral ridges, and dark apertural band) of the specimens were mapped across the phylogenetic tree and tested for phylogenetic signals. Data on shell characters of and from two different locations (i.e., Balambangan Island and Kinabatangan) where both species occurred sympatrically were then obtained to examine the geographical variations in shell form. The molecular phylogenetic analyses suggested that each of the three species was monophyletic and indicated congruence with only one of the shell characters (i.e., shell spiral ridges) in the current morphological-based classification. Although the geographical variation analyses suggested some of the shell characters indicating inter-species differences between the two species, these also pointed to intra-species differences between populations from different locations. This study on species is based on small sample size and the findings appear only applicable to species in Sabah. Nevertheless, we anticipate this study to be a starting point for more detailed investigations to include the other still little-known (. 100) species and highlights a need to assess variations in shell characters before they could be used in species classification.

摘要

是一个物种丰富的属,已记录的物种约有100种。该类群的物种水平鉴定一直基于壳形态、颜色以及一些基于小样本量的解剖特征。然而,壳形态的种间和种内变异对物种分类的影响以及其当前基于壳的分类与分子系统发育的一致性仍不清楚。在婆罗洲的沙巴发现了4个物种,由于壳形态的显著变异,它们的分类地位仍然不确定。本研究聚焦于沙巴的3个物种的系统发育关系和壳形态的地理变异。首先通过基于线粒体基因(16S rDNA和COI)和核基因(ITS-1)进行最大似然法和贝叶斯分析来估计这些物种的系统发育关系。然后,将标本的总共6个定量壳特征(即壳高、壳宽、开口高、开口宽、壳尖高以及壳高与宽的比率)和3个定性壳特征(即壳颜色模式、螺旋脊和深色开口带)映射到系统发育树上,并测试系统发育信号。接着获取了来自两个不同地点(即巴兰邦岸岛和基纳巴唐岸)的两种物种在同域分布时的壳特征数据,以研究壳形态的地理变异。分子系统发育分析表明,这3个物种中的每一个都是单系的,并且在当前基于形态的分类中仅与一个壳特征(即壳螺旋脊)一致。虽然地理变异分析表明一些壳特征显示了这两个物种之间的种间差异,但这些也指出了不同地点种群之间的种内差异。这项关于这些物种的研究基于小样本量,其结果似乎仅适用于沙巴的这些物种。尽管如此,我们预计这项研究将成为更详细研究的起点,以纳入其他仍鲜为人知的(超过100种)物种,并强调在将壳特征用于物种分类之前需要评估其变异情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7e/5669252/76032c1ff445/peerj-05-3981-g001.jpg

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