Suppr超能文献

鉴定冷水海葵(Cnidopus japonicus)毒液中具有新型半胱氨酸框架的不寻常肽。

Identification of unusual peptides with new Cys frameworks in the venom of the cold-water sea anemone Cnidopus japonicus.

机构信息

Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow, 119435, Russia.

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.

出版信息

Sci Rep. 2017 Nov 6;7(1):14534. doi: 10.1038/s41598-017-14961-1.

Abstract

Sea anemones (Actiniaria) are intensely popular objects of study in venomics. Order Actiniaria includes more than 1,000 species, thus presenting almost unlimited opportunities for the discovery of novel biologically active molecules. The venoms of cold-water sea anemones are studied far less than the venoms of tropical sea anemones. In this work, we analysed the molecular venom composition of the cold-water sea anemone Cnidopus japonicus. Two sets of NGS data from two species revealed molecules belonging to a variety of structural classes, including neurotoxins, toxin-like molecules, linear polypeptides (Cys-free), enzymes, and cytolytics. High-throughput proteomic analyses identified 27 compounds that were present in the venoms. Some of the toxin-like polypeptides exhibited novel Cys frameworks. To characterise their function in the venom, we heterologously expressed 3 polypeptides with unusual Cys frameworks (designated CjTL7, CjTL8, and AnmTx Cj 1c-1) in E. coli. Toxicity tests revealed that the CjTL8 polypeptide displays strong crustacean-specific toxicity, while AnmTx Cj 1c-1 is toxic to both crustaceans and insects. Thus, an improved NGS data analysis algorithm assisted in the identification of toxins with unusual Cys frameworks showing no homology according to BLAST. Our study shows the advantage of combining omics analysis with functional tests for active polypeptide discovery.

摘要

海葵(Actiniaria)是毒液学中备受关注的研究对象。Actiniaria 目包含超过 1000 种物种,因此为发现新型生物活性分子提供了几乎无限的机会。冷水海葵的毒液研究远少于热带海葵的毒液研究。在这项工作中,我们分析了冷水海葵 Cnidopus japonicus 的分子毒液组成。来自两个物种的两组 NGS 数据揭示了属于多种结构类别的分子,包括神经毒素、类毒素分子、线性多肽(不含半胱氨酸)、酶和细胞毒素。高通量蛋白质组学分析鉴定出 27 种存在于毒液中的化合物。一些类毒素多肽表现出新颖的半胱氨酸框架。为了研究它们在毒液中的功能,我们在大肠杆菌中异源表达了 3 种具有不寻常半胱氨酸框架的多肽(命名为 CjTL7、CjTL8 和 AnmTx Cj 1c-1)。毒性测试表明,CjTL8 多肽对甲壳类动物具有很强的特异性毒性,而 AnmTx Cj 1c-1 对甲壳类动物和昆虫都有毒性。因此,改进的 NGS 数据分析算法有助于根据 BLAST 鉴定出具有不寻常半胱氨酸框架且无同源性的毒素。我们的研究表明,将组学分析与功能测试相结合对于发现具有活性的多肽具有优势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac80/5673964/0e394b32f03d/41598_2017_14961_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验