Banerjee Shakri, Dutta Trina, Lahiri Sagar, Sengupta Shinjinee, Gangopadhyay Anushila, Kumar Karri Suresh, Chakraborty Sandeep, Bhattacharya Debasish, Ghosh Anil K
Drug Development, Diagnostics and Biotechnology Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S.C. Mullick Road, Kolkata 700032, India.
Infectious Diseases and Immunology Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S.C. Mullick Road, Kolkata 700032, India.
Biochem Biophys Rep. 2015 Aug 28;4:59-75. doi: 10.1016/j.bbrep.2015.08.015. eCollection 2015 Dec.
Spontaneous deamidation and isoaspartate (IsoAsp) formation contributes to aging and reduced longevity in cells. A protein-l-isoaspartate (d-aspartate) O-methyltransferase (PCMT) is responsible for minimizing IsoAsp moieties in most organisms.
PCMT was purified in its native form from yeast . The role of the native PCMT in cell survival and protein repair was investigated by manipulating intracellular PCMT levels with Oxidized Adenosine (AdOx) and Lithium Chloride (LiCl). Proteomic Identification of possible cellular targets was carried out using 2-dimensional gel electrophoresis, followed by on-Blot methylation and mass spectrometric analysis.
The 25.4 kDa native PCMT from was found to have a of 3.5 µM for AdoMet and 33.36 µM for IsoAsp containing Delta Sleep Inducing Peptide (DSIP) at pH 7.0. Native PCMT comprises of 232 amino acids which is coded by a 698 bp long nucleotide sequence. Phylogenetic comparison revealed the PCMT to be related more closely with the prokaryotic homologs. Increase in PCMT levels correlated with increased cell survival under physiological stresses. PCMT expression was seen to be linked with increased intracellular reactive oxygen species (ROS) concentration. Proteomic identification of possible cellular substrates revealed that PCMT interacts with proteins mainly involved with cellular housekeeping. PCMT effected both functional and structural repair in aged proteins .
Identification of PCMT in unicellular eukaryotes like promises to make investigations into its control machinery easier owing to the familiarity and flexibility of the system.
自发脱酰胺作用和异天冬氨酸(IsoAsp)的形成会导致细胞衰老和寿命缩短。蛋白质L-异天冬氨酸(D-天冬氨酸)O-甲基转移酶(PCMT)负责在大多数生物体中使IsoAsp部分最小化。
从酵母中以天然形式纯化PCMT。通过用氧化腺苷(AdOx)和氯化锂(LiCl)调节细胞内PCMT水平,研究天然PCMT在细胞存活和蛋白质修复中的作用。使用二维凝胶电泳对可能的细胞靶点进行蛋白质组学鉴定,随后进行印迹甲基化和质谱分析。
在pH 7.0条件下,发现来自酵母的25.4 kDa天然PCMT对腺苷甲硫氨酸(AdoMet)的Km值为3.5 μM,对含异天冬氨酸的δ睡眠诱导肽(DSIP)的Km值为33.36 μM。天然PCMT由232个氨基酸组成,由一个698 bp长的核苷酸序列编码。系统发育比较表明,PCMT与原核生物同源物的关系更为密切。PCMT水平的增加与生理应激下细胞存活率的增加相关。PCMT的表达与细胞内活性氧(ROS)浓度的增加有关。对可能的细胞底物进行蛋白质组学鉴定发现,PCMT与主要参与细胞内务管理的蛋白质相互作用。PCMT对老化蛋白质进行功能和结构修复。
在单细胞真核生物如酵母中鉴定出PCMT,由于该系统的熟悉性和灵活性,有望使对其调控机制的研究更加容易。