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陆生甲壳纲动物中GHF9内切-β-1,4-葡聚糖酶的cDNA序列。

cDNA sequences of GHF9 endo-β-1,4-glucanases in terrestrial Crustacea.

作者信息

Gray Michael, Linton Stuart M, Allardyce Benjamin J

机构信息

School of Life and Environmental Sciences, Deakin University, 75 Pigdons Road, Waurn Ponds, Victoria 3217, Australia.

School of Life and Environmental Sciences, Deakin University, 75 Pigdons Road, Waurn Ponds, Victoria 3217, Australia.

出版信息

Gene. 2018 Feb 5;642:408-422. doi: 10.1016/j.gene.2017.11.030. Epub 2017 Nov 11.

DOI:10.1016/j.gene.2017.11.030
PMID:29133147
Abstract

This study aimed to sequence and identify a glycosyl hydrolase family 9 (GHF9) endo-β-1,4-glucanase expressed in the midgut gland of the herbivorous gecarcinid land crab, Gecarcoidea natalis. Hence this would explain the gene responsible for the production of previously purified and characterised endo-β-1,4-glucanases. Three different transcripts, two complete and one partial were sequenced from cDNA and an open reading frame of 1383bp was produced. Translated, this would produce a putative protein of 460 amino acid residues, including a 16 amino acid residue signal peptide. The mature protein (without signal peptide) is predicted to have a molecular mass of 47.6-47.7kDa; this closely matches the molecular mass (47.4kDa) of one of the three endo-β-1,4-glucanase/lichenase enzymes purified previously from G. natalis. It is therefore proposed that the gene described here encodes one of the previously characterised enzymes. The presence of multiple transcripts suggests gene duplication. To confirm that the gene is widely expressed within the Crustacea, cDNA encoding a GHF9 endo-β-1,4-glucanase was also sequenced in diverse crustaceans, the deposit feeding soldier crab, Mictyris platycheles and the terrestrial hermit crabs, Coenobita purlatus and C. brevimanus. An open reading frame of 1356bp was sequence from M. platycheles, while an incomplete open reading frames of 1384 and 1523bp were respectively sequenced from Coenobita brevimanus and C. perlatus. The midgut gland of M. platycheles contained activity (0.704±0.218μmol reducing sugars produced. min·mg tissue wet weight) of a 26.3±0.3(5) endo-β-1,4-glucanase isozyme (determined from activity staining). These species, particularly M. platycheles does not consume and digest significant amounts of plant cellulose. This implies that the ancestral enzyme is not a cellulase, but rather it may be involved in hydrolysing cellulose like polysaccharides within other organisms such as algae.

摘要

本研究旨在对一种在食草性地蟹(Gecarcoidea natalis)中肠腺表达的糖基水解酶家族9(GHF9)内切-β-1,4-葡聚糖酶进行测序和鉴定。因此,这将解释负责产生先前纯化和表征的内切-β-1,4-葡聚糖酶的基因。从cDNA中对三种不同的转录本进行了测序,其中两个是完整的,一个是部分的,并产生了一个1383bp的开放阅读框。经翻译,这将产生一个含有460个氨基酸残基的推定蛋白,包括一个16个氨基酸残基的信号肽。预测成熟蛋白(不含信号肽)的分子量为47.6 - 47.7kDa;这与先前从G. natalis纯化的三种内切-β-1,4-葡聚糖酶/地衣酶之一的分子量(47.4kDa)非常匹配。因此,有人提出这里描述的基因编码先前表征的酶之一。多个转录本的存在表明基因复制。为了确认该基因在甲壳纲动物中广泛表达,还对不同的甲壳纲动物进行了编码GHF9内切-β-1,4-葡聚糖酶的cDNA测序,包括沉积取食的战士蟹(Mictyris platycheles)以及陆生寄居蟹(Coenobita purlatus和C. brevimanus)。从M. platycheles中测序得到一个1356bp的开放阅读框,而从Coenobita brevimanus和C. perlatus中分别测序得到1384bp和1523bp的不完整开放阅读框。M. platycheles的中肠腺含有一种26.3±0.3(5)的内切-β-1,4-葡聚糖酶同工酶的活性(通过活性染色测定,每毫克组织湿重每分钟产生0.704±0.218μmol还原糖)。这些物种,特别是M. platycheles,并不消耗和消化大量的植物纤维素。这意味着祖先酶不是纤维素酶,而是可能参与水解其他生物(如藻类)体内类似纤维素的多糖。

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