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种内挥发性相互作用影响KCCM 60345的生长速率和胞外代谢组。

Intraspecies Volatile Interactions Affect Growth Rates and Exometabolomes in KCCM 60345.

作者信息

Singh Digar, Lee Choong Hwan

机构信息

Department of Bioscience and Biotechnology, Konkuk University, Seoul 05029, Republic of Korea.

出版信息

J Microbiol Biotechnol. 2018 Feb 28;28(2):199-209. doi: 10.4014/jmb.1711.11005.

Abstract

Volatile organic compounds (VOCs) are increasingly been recognized as the chemical mediators of mold interactions, shaping their community dynamics, growth, and metabolism. Herein, we selectively examined the time-correlated (0 D-11 D, where D = incubation days) effects of intraspecies VOC-mediated interactions (VMI) on KCCM 60345 (S1), following co-cultivation with partner strain KACC 44967 (S2), in a specially designed twin plate assembly. The comparative evaluation of S1 (S1 subjected to VMI with S2) and its control (S1) showed a notable disparity in their radial growth (S1 < S1) at 5 D, protease activity (S1 > S1) at 3-5 D, amylase activity (S1 < S1) at 3-5 D, and antioxidant levels (S1 > S1) at 3 D. Furthermore, we observed a distinct clustering pattern for gas chromatography-time of flight-mass spectrometry datasets from 5 D extracts of S1 and S1 in principle component analysis (PC1: 30.85%; PC2: 10.31%) and partial least squares discriminant analysis (PLS-DA) (PLS1: 30.77; PLS2: 10.15%). Overall, 43 significantly discriminant metabolites were determined for engendering the metabolic variance based on the PLS-DA model (VIP > 0.7, < 0.05). In general, a marked disparity in the relative abundance of amino acids (S1 > S1) at 5 D, organic acids (S1 > S1) at 5 D, and kojic acid (S1 < S1) at 5-7 D were observed. Examining the headspace VOCs shared between S1 and S2 in the twin plate for 5 D incubated samples, we observed the relatively higher abundance of C-8 VOCs (1-octen-3-ol, (5Z)-octa-1,5-dien-3-ol, 3-octanone, 1-octen-3-ol acetate) having known semiochemical functions. The present study potentially illuminates the effects of VMI on commercially important growth and biochemical phenotypes with subtle details of altered metabolomes.

摘要

挥发性有机化合物(VOCs)越来越被认为是霉菌相互作用的化学介质,影响着它们的群落动态、生长和代谢。在此,我们在一个特别设计的双板组件中,选择性地研究了种内VOC介导的相互作用(VMI)与伙伴菌株KACC 44967(S2)共培养后,对KCCM 60345(S1)的时间相关(0天至11天,其中D =培养天数)影响。对S1(与S2进行VMI处理的S1)及其对照(S1)的比较评估显示,在第5天它们的径向生长(S1 < S1)、第3至5天的蛋白酶活性(S1 > S1)、第3至5天的淀粉酶活性(S1 < S1)以及第3天的抗氧化水平(S1 > S1)存在显著差异。此外,在主成分分析(PC1:30.85%;PC2:10.31%)和偏最小二乘判别分析(PLS-DA)(PLS1:30.77;PLS2:10.15%)中,我们观察到来自S1和S1第5天提取物的气相色谱 - 飞行时间 - 质谱数据集有明显的聚类模式。总体而言,基于PLS-DA模型(VIP > 0.7,< 0.05)确定了43种显著判别代谢物以产生代谢差异。一般来说,观察到在第5天氨基酸(S1 > S1)、第5天有机酸(S1 > S1)以及第5至7天 kojic 酸(S1 < S1)的相对丰度存在明显差异。检查双板中第5天培养样品的S1和S2之间共享的顶空VOCs,我们观察到具有已知信息素功能的C-8 VOCs(1-辛烯-3-醇、(5Z)-辛-1,5-二烯-3-醇、3-辛酮、1-辛烯-3-醇乙酸酯)相对丰度较高。本研究可能阐明了VMI对商业上重要的生长和生化表型的影响以及代谢组改变的细微细节。

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