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挥发性物质介导的菌株间相互作用调节形态转变和胞外代谢组。

Volatiles Mediated Interactions Between Strains Modulate Morphological Transition and Exometabolomes.

作者信息

Singh Digar, Lee Choong H

机构信息

Department of Bioscience and Biotechnology, Konkuk University, Seoul, South Korea.

出版信息

Front Microbiol. 2018 Apr 4;9:628. doi: 10.3389/fmicb.2018.00628. eCollection 2018.

Abstract

Notwithstanding its mitosporic nature, an improbable morpho-transformation state i. e., sclerotial development (SD), is vaguely known in . Nevertheless an intriguing phenomenon governing mold's development and stress response, the effects of exogenous factors engendering SD, especially the volatile organic compounds (VOCs) mediated interactions (VMI) pervasive in microbial niches have largely remained unexplored. Herein, we examined the effects of intra-species VMI on SD in RIB 40, followed by comprehensive analyses of associated growth rates, pH alterations, biochemical phenotypes, and exometabolomes. We cultivated RIB 40 (S1: KACC 44967) opposite a non-SD partner strain, (S2: KCCM 60345), conditioning VMI in a specially designed "twin plate assembly." Notably, SD in S1 was delayed relative to its non-conditioned control (S1) cultivated without partner strain (S2) in twin plate. Selectively evaluating RIB 40 (S1 vs. S1) for altered phenotypes concomitant to SD, we observed a marked disparity for corresponding growth rates (S1 < S1), media pH (S1 > S1), and biochemical characteristics ., protease (S1 > S1), amylase (S1 > nS1) , and antioxidants (S1 > S1) levels. The partial least squares-discriminant analysis (PLS-DA) of gas chromatography-time of flight-mass spectrometry (GC-TOF-MS) datasets for primary metabolites exhibited a clustered pattern (PLS1, 22.04%; PLS2, 11.36%), with 7 days incubated S1 extracts showed higher abundance of amino acids, sugars, and sugar alcohols with lower organic acids and fatty acids levels, relative to S1. Intriguingly, the higher amino acid and sugar alcohol levels were positively correlated with antioxidant activity, likely impeding SD in S1. Further, the PLS-DA (PLS1, 18.11%; PLS2, 15.02%) based on liquid chromatography-mass spectrometry (LC-MS) datasets exhibited a notable disparity for post-SD (9-11 days) sample extracts with higher oxylipins and 13-desoxypaxilline levels in S1 relative to S1, intertwining morphogenesis and secondary metabolism. The analysis of VOCs for the 7 days incubated samples displayed considerably higher accumulation of C-8 compounds in the headspace of twin-plate experimental sets (S1:S2) compared to those in non-conditioned controls (S1 and S2-without respective partner strains), potentially triggering altered morpho-transformation and concurring biochemical as well as metabolic states in molds.

摘要

尽管其具有有丝分裂孢子的性质,但一种不太可能的形态转化状态,即菌核发育(SD),在……中却鲜为人知。然而,作为一种控制霉菌发育和应激反应的有趣现象,导致菌核发育的外源因素的影响,尤其是微生物生态位中普遍存在的挥发性有机化合物(VOCs)介导的相互作用(VMI),在很大程度上仍未得到探索。在此,我们研究了种内VMI对RIB 40中菌核发育的影响,随后对相关生长速率、pH变化、生化表型和胞外代谢组进行了全面分析。我们在一个特别设计的“双平板组件”中,将RIB 40(S1:KACC 44967)与一个非菌核发育的伙伴菌株(S2:KCCM 60345)相对培养,以调节VMI。值得注意的是,与在双平板中没有伙伴菌株(S2)培养的非条件对照(S1)相比,S1中的菌核发育延迟。通过选择性评估RIB 40(S1与S1)伴随菌核发育而改变的表型,我们观察到相应生长速率(S1 < S1)、培养基pH(S1 > S1)和生化特性(蛋白酶(S1 > S1)、淀粉酶(S1 > nS1)以及抗氧化剂(S1 > S1)水平)存在显著差异。对初级代谢产物的气相色谱 - 飞行时间质谱(GC - TOF - MS)数据集进行的偏最小二乘判别分析(PLS - DA)呈现出聚类模式(PLS1,22.04%;PLS2,11.36%),与S1相比,培养7天的S1提取物中氨基酸、糖和糖醇的丰度更高,而有机酸和脂肪酸水平较低。有趣的是,较高的氨基酸和糖醇水平与抗氧化活性呈正相关,这可能阻碍了S1中的菌核发育。此外,基于液相色谱 - 质谱(LC - MS)数据集的PLS - DA(PLS1,18.11%;PLS2,15.02%)显示,与S1相比,菌核发育后(9 - 11天)的S1样品提取物中氧脂素和13 - 脱氧帕西利林水平更高,这将形态发生与次级代谢交织在一起。对培养7天的样品中的VOCs分析表明,与非条件对照(S1和S2 - 没有各自的伙伴菌株)相比,双平板实验组(S1:S2)顶空中C - 8化合物的积累量显著更高,这可能触发了霉菌中形态转化以及并发的生化和代谢状态的改变。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce68/5893800/6be8728e7bc6/fmicb-09-00628-g0001.jpg

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