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Boc-Aib-Val-Aib-Aib-Val-Val-Val-Aib-Val-Aib-OMe共结晶构象中的α-螺旋和混合3(10)/α-螺旋

Alpha-helix and mixed 3(10)/alpha-helix in cocrystallized conformers of Boc-Aib-Val-Aib-Aib-Val-Val-Val-Aib-Val-Aib-OMe.

作者信息

Karle I L, Flippen-Anderson J L, Uma K, Balaram H, Balaram P

机构信息

Laboratory for the Structure of Matter, Naval Research Laboratory, Washington, DC 20375-5000.

出版信息

Proc Natl Acad Sci U S A. 1989 Feb;86(3):765-9. doi: 10.1073/pnas.86.3.765.

Abstract

Two molecules of Boc-Aib-Val-Aib-Aib-Val-Val-Val-Aib-Val-Aib-OMe (where Boc is t-butoxycarbonyl and Aib is alpha-aminoisobutyryl) cocrystallize in a triclinic cell with different helical conformations. One molecule is completely alpha-helical with seven 5----1 intramolecular hydrogen bonds. It forms three head-to-tail NH...O = C hydrogen bonds to other molecules of the same conformation. The second molecule has a mixed 3(10)/alpha-helix conformation with three 4----1 hydrogen bonds and four 5----1 hydrogen bonds; furthermore, there is a helix reversal at both termini. The second molecule forms only two head-to-tail hydrogen bonds with molecules of the same type, and the N(3)H group does not participate in any hydrogen bonding. The two different types of helices occur in alternate sheets in the crystal, where each sheet is composed of adjacent rods of helices formed by head-to-tail hydrogen bonding. Within each sheet, containing helices of only one type of conformation, the helices aggregate in a parallel mode. Between the sheets of different helices, the aggregation is antiparallel. The peptide, with formula C51H92N10O13, crystallizes in space group P1 with Z = 2 and cell parameters a = 10.047 +/- 0.002 A, b = 16.684 +/- 0.003 A, c = 19.198 +/- 0.004 A, alpha = 80.30 degrees +/- 0.01 degrees, beta = 85.74 degrees +/- 0.01 degrees, and gamma = 83.03 degrees +/- 0.01 degrees; overall agreement factor R = 6.7% for 6053 data ([F0] greater than 3 sigma) and 0.96-A resolution.

摘要

两分子的Boc-Aib-Val-Aib-Aib-Val-Val-Val-Aib-Val-Aib-OMe(其中Boc为叔丁氧羰基,Aib为α-氨基异丁酰基)在三斜晶胞中共结晶,具有不同的螺旋构象。一个分子完全呈α-螺旋结构,有七个5----1分子内氢键。它与相同构象的其他分子形成三个头对尾的NH...O = C氢键。第二个分子具有混合的3(10)/α-螺旋构象,有三个4----1氢键和四个5----1氢键;此外,在两个末端都有螺旋反转。第二个分子仅与相同类型的分子形成两个头对尾的氢键,且N(3)H基团不参与任何氢键形成。两种不同类型的螺旋出现在晶体中的交替片层中,其中每个片层由通过头对尾氢键形成的相邻螺旋棒组成。在每个仅包含一种构象螺旋的片层内,螺旋以平行模式聚集。在不同螺旋的片层之间,聚集是反平行的。该肽的化学式为C51H92N10O13,结晶于空间群P1中,Z = 2,晶胞参数a = 10.047 +/- 0.002 Å,b = 16.684 +/- 0.003 Å,c = 19.198 +/- 0.004 Å,α = 80.30° +/- 0.01°,β = 85.74° +/- 0.01°,γ = 83.03° +/- 0.01°;对于6053个数据([F0]大于3σ)和0.96-Å分辨率,总体一致性因子R = 6.7%。

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