Suppr超能文献

从 Mo(IV)中心促进酸产物释放:对钼氧转移酶氧原子转移反应性的相关性。

Acid-facilitated product release from a Mo(IV) center: relevance to oxygen atom transfer reactivity of molybdenum oxotransferases.

机构信息

Department of Chemistry and Biochemistry, New Mexico State University, Las Cruces, NM, 88003, USA.

Department of Chemistry, Middle Tennessee State University, Murfreesboro, TN, 37132, USA.

出版信息

J Biol Inorg Chem. 2018 Mar;23(2):193-207. doi: 10.1007/s00775-017-1518-4. Epub 2017 Nov 25.

Abstract

We report that pyridinium ions (HPyr) accelerate the conversion of [TpMoOCl(OPMe)] (1) to [TpMoOCl(NCCH)] (2) by 10-fold, affording 2 in near-quantitative yield; Tp* = hydrotris(3,5-dimethyl-1-pyrazolyl)borate. This novel reactivity and the mechanism of this reaction were investigated in detail. The formation of 2 followed pseudo-first-order kinetics, with the observed pseudo-first-order rate constant (k ) linearly correlated with [HPyr]. An Eyring plot revealed that this HPyr-facilitated reaction has a small positive value of ∆S indicative of a dissociative interchange (I) mechanism, different from the slower associative interchange (I) mechanism in the absence of HPyr marked with a negative ∆S . Interestingly, log(k ) was found to be linearly correlated to the acidity of substituted pyridinium ions. This novel reactivity is further investigated using combined DFT and ab initio coupled cluster methods. Different reaction pathways, including I, I, and possible alternative routes in the absence or presence of HPyr, were considered, and enthalpy and free energies were calculated for each pathway. Our computational results further underscored that the I route is energetically favored in the presence of HPyr, in contrast with the preferred I-NNO pathway in the absence of HPyr. Our computational results also revealed molecular-level details for the HPyr-facilitated I route. Specifically, HPyr initially becomes hydrogen-bonded to the oxygen atom of the Mo(IV)-OPMe moiety, which lowers the activation barrier for the Mo-OPMe bond cleavage in a rate-limiting step to dissociate the OPMe product. The implications of our results were discussed in the context of molybdoenzymes, particularly the reductive half-reaction of sulfite oxidase.

摘要

我们报告说,吡啶鎓离子 (HPyr) 将 [TpMoOCl(OPMe)] (1) 转化为 [TpMoOCl(NCCH)] (2) 的速度加快了 10 倍,几乎定量得到了 2;Tp* = 三(3,5-二甲基-1-吡唑基)硼酸盐。详细研究了这种新的反应性和反应机制。2 的形成遵循准一级动力学,观察到的准一级速率常数 (k) 与 [HPyr] 呈线性相关。Eyring 图表明,该 HPyr 促进的反应具有较小的正值 ∆S,表明是离解交换 (I) 机制,与没有 HPyr 时较慢的缔合交换 (I) 机制不同,后者的 ∆S 为负值。有趣的是,发现 log(k) 与取代吡啶鎓离子的酸度呈线性相关。使用组合 DFT 和从头算耦合簇方法进一步研究了这种新的反应性。考虑了不同的反应途径,包括 I、I 和在没有或存在 HPyr 时可能的替代途径,并计算了每条途径的焓和自由能。我们的计算结果进一步强调,在 HPyr 存在下,I 途径在能量上是有利的,与没有 HPyr 时优先的 I-NNO 途径形成对比。我们的计算结果还揭示了 HPyr 促进的 I 途径的分子水平细节。具体而言,HPyr 最初与 Mo(IV)-OPMe 部分的氧原子形成氢键,这降低了 Mo-OPMe 键在限速步骤中裂解以解离 OPMe 产物的活化能垒。我们的结果在钼酶的背景下,特别是亚硫酸盐氧化酶的还原半反应中讨论了其意义。

相似文献

本文引用的文献

5
Lewis Acid Coupled Electron Transfer of Metal-Oxygen Intermediates.金属-氧中间体的路易斯酸耦合电子转移
Chemistry. 2015 Dec 1;21(49):17548-59. doi: 10.1002/chem.201502693. Epub 2015 Sep 25.
7
Recent developments in the study of molybdoenzyme models.钼酶模型研究的最新进展。
J Biol Inorg Chem. 2015 Mar;20(2):373-83. doi: 10.1007/s00775-014-1228-0. Epub 2015 Jan 13.
9
Sulfite-oxidizing enzymes.亚硫酸盐氧化酶
J Biol Inorg Chem. 2015 Mar;20(2):253-64. doi: 10.1007/s00775-014-1197-3. Epub 2014 Sep 27.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验