Chen Yinsheng, Li Zeju, Wu Guoqing, Yu Jinhua, Wang Yuanyuan, Lv Xiaofei, Ju Xue, Chen Zhongping
a Department of Neurosurgery/Neuro-oncology , Sun Yat-Sen University Cancer Center , Guangzhou , China.
c State Key Laboratory of Oncology in South China , Guangzhou , China.
Int J Neurosci. 2018 Jul;128(7):608-618. doi: 10.1080/00207454.2017.1408613. Epub 2017 Dec 12.
Due to the totally different therapeutic regimens needed for primary central nervous system lymphoma (PCNSL) and glioblastoma (GBM), accurate differentiation of the two diseases by noninvasive imaging techniques is important for clinical decision-making.
Thirty cases of PCNSL and 66 cases of GBM with conventional T1-contrast magnetic resonance imaging (MRI) were analyzed in this study. Convolutional neural networks was used to segment tumor automatically. A modified scale invariant feature transform (SIFT) method was utilized to extract three-dimensional local voxel arrangement information from segmented tumors. Fisher vector was proposed to normalize the dimension of SIFT features. An improved genetic algorithm (GA) was used to extract SIFT features with PCNSL and GBM discrimination ability. The data-set was divided into a cross-validation cohort and an independent validation cohort by the ratio of 2:1. Support vector machine with the leave-one-out cross-validation based on 20 cases of PCNSL and 44 cases of GBM was employed to build and validate the differentiation model.
Among 16,384 high-throughput features, 1356 features show significant differences between PCNSL and GBM with p < 0.05 and 420 features with p < 0.001. A total of 496 features were finally chosen by improved GA algorithm. The proposed method produces PCNSL vs. GBM differentiation with an area under the curve (AUC) curve of 99.1% (98.2%), accuracy 95.3% (90.6%), sensitivity 85.0% (80.0%) and specificity 100% (95.5%) on the cross-validation cohort (and independent validation cohort).
Since the local voxel arrangement characterization provided by SIFT features, proposed method produced more competitive PCNSL and GBM differentiation performance by using conventional MRI than methods based on advanced MRI.
由于原发性中枢神经系统淋巴瘤(PCNSL)和胶质母细胞瘤(GBM)需要完全不同的治疗方案,通过非侵入性成像技术准确区分这两种疾病对于临床决策至关重要。
本研究分析了30例PCNSL和66例GBM的常规T1增强磁共振成像(MRI)。使用卷积神经网络自动分割肿瘤。采用改进的尺度不变特征变换(SIFT)方法从分割后的肿瘤中提取三维局部体素排列信息。提出使用Fisher向量对SIFT特征的维度进行归一化。使用改进的遗传算法(GA)提取具有PCNSL和GBM鉴别能力的SIFT特征。数据集按2:1的比例分为交叉验证队列和独立验证队列。基于20例PCNSL和44例GBM,采用留一法交叉验证的支持向量机来构建和验证鉴别模型。
在16384个高通量特征中,1356个特征在PCNSL和GBM之间显示出显著差异(p < 0.05),420个特征差异极显著(p < 0.001)。最终通过改进的GA算法选择了496个特征。所提出的方法在交叉验证队列(和独立验证队列)上对PCNSL与GBM的鉴别,曲线下面积(AUC)为99.1%(98.2%),准确率为95.3%(90.6%),灵敏度为85.0%(80.0%),特异性为100%(95.5%)。
由于SIFT特征提供了局部体素排列特征,与基于先进MRI的方法相比,所提出的方法使用常规MRI对PCNSL和GBM的鉴别性能更具竞争力。