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临床激酶药物的目标格局。

The target landscape of clinical kinase drugs.

作者信息

Klaeger Susan, Heinzlmeir Stephanie, Wilhelm Mathias, Polzer Harald, Vick Binje, Koenig Paul-Albert, Reinecke Maria, Ruprecht Benjamin, Petzoldt Svenja, Meng Chen, Zecha Jana, Reiter Katrin, Qiao Huichao, Helm Dominic, Koch Heiner, Schoof Melanie, Canevari Giulia, Casale Elena, Depaolini Stefania Re, Feuchtinger Annette, Wu Zhixiang, Schmidt Tobias, Rueckert Lars, Becker Wilhelm, Huenges Jan, Garz Anne-Kathrin, Gohlke Bjoern-Oliver, Zolg Daniel Paul, Kayser Gian, Vooder Tonu, Preissner Robert, Hahne Hannes, Tõnisson Neeme, Kramer Karl, Götze Katharina, Bassermann Florian, Schlegl Judith, Ehrlich Hans-Christian, Aiche Stephan, Walch Axel, Greif Philipp A, Schneider Sabine, Felder Eduard Rudolf, Ruland Juergen, Médard Guillaume, Jeremias Irmela, Spiekermann Karsten, Kuster Bernhard

机构信息

Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany.

German Cancer Consortium (DKTK), Heidelberg, Germany.

出版信息

Science. 2017 Dec 1;358(6367). doi: 10.1126/science.aan4368.

Abstract

Kinase inhibitors are important cancer therapeutics. Polypharmacology is commonly observed, requiring thorough target deconvolution to understand drug mechanism of action. Using chemical proteomics, we analyzed the target spectrum of 243 clinically evaluated kinase drugs. The data revealed previously unknown targets for established drugs, offered a perspective on the "druggable" kinome, highlighted (non)kinase off-targets, and suggested potential therapeutic applications. Integration of phosphoproteomic data refined drug-affected pathways, identified response markers, and strengthened rationale for combination treatments. We exemplify translational value by discovering SIK2 (salt-inducible kinase 2) inhibitors that modulate cytokine production in primary cells, by identifying drugs against the lung cancer survival marker MELK (maternal embryonic leucine zipper kinase), and by repurposing cabozantinib to treat FLT3-ITD-positive acute myeloid leukemia. This resource, available via the ProteomicsDB database, should facilitate basic, clinical, and drug discovery research and aid clinical decision-making.

摘要

激酶抑制剂是重要的癌症治疗药物。多药理学现象普遍存在,需要进行全面的靶点解析以了解药物的作用机制。我们运用化学蛋白质组学分析了243种经临床评估的激酶药物的靶点谱。数据揭示了已上市药物先前未知的靶点,为“可成药”激酶组提供了一个视角,突出了(非)激酶脱靶效应,并提出了潜在的治疗应用。磷酸化蛋白质组学数据的整合完善了受药物影响的信号通路,识别了反应标志物,并强化了联合治疗的理论依据。我们通过发现可调节原代细胞中细胞因子产生的盐诱导激酶2(SIK2)抑制剂、鉴定针对肺癌生存标志物母源性胚胎亮氨酸拉链激酶(MELK)的药物以及将卡博替尼重新用于治疗FLT3-ITD阳性急性髓系白血病,例证了该研究的转化价值。通过ProteomicsDB数据库可获取这一资源,它应有助于基础研究、临床研究和药物研发,并辅助临床决策。

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4
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Cancer Cell. 2016 Nov 14;30(5):708-722. doi: 10.1016/j.ccell.2016.09.010. Epub 2016 Oct 20.
5
Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.
ACS Chem Biol. 2016 Dec 16;11(12):3400-3411. doi: 10.1021/acschembio.6b00709. Epub 2016 Nov 7.
6
The Perseus computational platform for comprehensive analysis of (prote)omics data.
Nat Methods. 2016 Sep;13(9):731-40. doi: 10.1038/nmeth.3901. Epub 2016 Jun 27.
7
Proteogenomics connects somatic mutations to signalling in breast cancer.
Nature. 2016 Jun 2;534(7605):55-62. doi: 10.1038/nature18003. Epub 2016 May 25.
9
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PLoS One. 2016 Apr 15;11(4):e0153518. doi: 10.1371/journal.pone.0153518. eCollection 2016.
10
Cabozantinib is selectively cytotoxic in acute myeloid leukemia cells with FLT3-internal tandem duplication (FLT3-ITD).
Cancer Lett. 2016 Jul 1;376(2):218-25. doi: 10.1016/j.canlet.2016.04.004. Epub 2016 Apr 6.

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