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六对患先天性心脏病的中国同卵双胞胎的拷贝数变异与外显子组测序分析

Copy Number Variants and Exome Sequencing Analysis in Six Pairs of Chinese Monozygotic Twins Discordant for Congenital Heart Disease.

作者信息

Xu Yuejuan, Li Tingting, Pu Tian, Cao Ruixue, Long Fei, Chen Sun, Sun Kun, Xu Rang

机构信息

Department of Pediatric Cardiology,Xinhua Hospital,affiliated to Shanghai Jiao Tong University School of Medicine,Shanghai,China.

School of Biomedical Science,Li Ka Shing Faculty of Medicine,The University of Hong Kong,Hong Kong,China.

出版信息

Twin Res Hum Genet. 2017 Dec;20(6):521-532. doi: 10.1017/thg.2017.57.

Abstract

Congenital heart disease (CHD) is one of the most common birth defects. More than 200 susceptibility loci have been identified for CHDs, yet a large part of the genetic risk factors remain unexplained. Monozygotic (MZ) twins are thought to be completely genetically identical; however, discordant phenotypes have been found in MZ twins. Recent studies have demonstrated genetic differences between MZ twins. We aimed to test whether copy number variants (CNVs) and/or genetic mutation differences play a role in the etiology of CHDs by using single nucleotide polymorphism (SNP) genotyping arrays and whole exome sequencing of twin pairs discordant for CHDs. Our goal was to identify mutations present only in the affected twins, which could identify novel candidates for CHD susceptibility loci. We present a comprehensive analysis for the CNVs and genetic mutation results of the selected individuals but detected no consistent differences within the twin pairs. Our study confirms that chromosomal structure or genetic mutation differences do not seem to play a role in the MZ twins discordant for CHD.

摘要

先天性心脏病(CHD)是最常见的出生缺陷之一。已确定200多个CHD易感基因座,但很大一部分遗传风险因素仍未得到解释。同卵(MZ)双胞胎被认为在基因上完全相同;然而,在MZ双胞胎中发现了不一致的表型。最近的研究表明MZ双胞胎之间存在基因差异。我们旨在通过使用单核苷酸多态性(SNP)基因分型阵列和对患CHD不一致的双胞胎对进行全外显子组测序,来测试拷贝数变异(CNV)和/或基因突变差异是否在CHD的病因中起作用。我们的目标是识别仅存在于受影响双胞胎中的突变,这可能识别出CHD易感基因座的新候选者。我们对选定个体的CNV和基因突变结果进行了全面分析,但在双胞胎对中未检测到一致的差异。我们的研究证实,染色体结构或基因突变差异似乎在患CHD不一致的MZ双胞胎中不起作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e67/5729853/0e91bde4c0dd/S1832427417000573_fig1.jpg

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