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在果蝇系统发育中,胰岛素受体 P2 启动子上游的 dFOXO 结合位点的特征。

Characterization of dFOXO binding sites upstream of the Insulin Receptor P2 promoter across the Drosophila phylogeny.

机构信息

Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia, Universitat de Barcelona, Barcelona, Spain.

Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.

出版信息

PLoS One. 2017 Dec 4;12(12):e0188357. doi: 10.1371/journal.pone.0188357. eCollection 2017.

Abstract

The insulin/TOR signal transduction pathway plays a critical role in determining such important traits as body and organ size, metabolic homeostasis and life span. Although this pathway is highly conserved across the animal kingdom, the affected traits can exhibit important differences even between closely related species. Evolutionary studies of regulatory regions require the reliable identification of transcription factor binding sites. Here we have focused on the Insulin Receptor (InR) expression from its P2 promoter in the Drosophila genus, which in D. melanogaster is up-regulated by hypophosphorylated Drosophila FOXO (dFOXO). We have finely characterized this transcription factor binding sites in vitro along the 1.3 kb region upstream of the InR P2 promoter in five Drosophila species. Moreover, we have tested the effect of mutations in the characterized dFOXO sites of D. melanogaster in transgenic flies. The number of experimentally established binding sites varies across the 1.3 kb region of any particular species, and their distribution also differs among species. In D. melanogaster, InR expression from P2 is differentially affected by dFOXO binding sites at the proximal and distal halves of the species 1.3 kb fragment. The observed uneven distribution of binding sites across this fragment might underlie their differential contribution to regulate InR transcription.

摘要

胰岛素/TOR 信号转导通路在决定身体和器官大小、代谢稳态和寿命等重要特征方面起着关键作用。尽管该通路在动物界中高度保守,但即使在密切相关的物种之间,受影响的特征也可能存在重要差异。调控区域的进化研究需要可靠地识别转录因子结合位点。在这里,我们专注于果蝇属中胰岛素受体 (InR) 从其 P2 启动子的表达,在 D. melanogaster 中,低磷酸化的 Drosophila FOXO (dFOXO) 上调了 InR 的表达。我们在体外精细地表征了该转录因子在 5 种果蝇物种的 InR P2 启动子上游 1.3 kb 区域的结合位点。此外,我们还测试了在转基因果蝇中突变已鉴定出的 dFOXO 结合位点对 dFOXO 结合位点的影响。在任何特定物种的 1.3 kb 区域内,实验确定的结合位点的数量都有所不同,它们在物种之间的分布也不同。在 D. melanogaster 中,来自 P2 的 InR 表达受物种 1.3 kb 片段近端和远端的 dFOXO 结合位点的差异影响。在该片段中观察到的结合位点分布不均,可能是它们对调节 InR 转录的不同贡献的基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebd5/5714339/5f47a3d2bde3/pone.0188357.g001.jpg

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