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通过分子模拟方法对磺基苯基膦酸锆层进行几何优化。

Geometry optimization of zirconium sulfophenylphosphonate layers by molecular simulation methods.

作者信息

Škoda Jakub, Pospíšil Miroslav, Kovář Petr, Melánová Klára, Svoboda Jan, Beneš Ludvík, Zima Vítězslav

机构信息

Charles University, Faculty of Mathematics and Physics, Ke Karlovu 3, 121 16, Prague 2, Czech Republic.

Institute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovský Sq. 2, 162 06, Prague 6, Czech Republic.

出版信息

J Mol Model. 2017 Dec 12;24(1):10. doi: 10.1007/s00894-017-3549-8.

DOI:10.1007/s00894-017-3549-8
PMID:29234891
Abstract

Classical molecular simulation methods were used for a detailed structural description of zirconium 4-sulfophenylphosphonate and zirconium phenylphosphonate 4-sulfophenylphosphonates with general formula Zr(HOSCHPO) (CHPO) ·yHO (x = 0.7-2; y = 0 or 2). First, models describing the structure of zirconium 4-sulfophenylphosphonate (x = 2) were calculated for the hydrated (y = 2) and dehydrated (y = 0) compounds. Subsequently, models for two mixed zirconium phenylphosphonate 4-sulfophenylphosphonates (x = 1.3 and 0.7) were calculated. Optimized models suggest that the presence of water molecules between sulfo groups creates a water-sulfonate layer with a system of hydrogen bonds. We suppose that this arrangement is the reason for a higher proton conductivity of the hydrated samples compared to dehydrated samples. When the water molecules are removed, a small decrease in the basal spacing (around 0.06 Å) is observed. This behavior is confirmed by the simulated models, where no significant changes in the structure on dehydration were observed except the absence of the water molecules and a lower number of hydrogen bonds between two adjacent sulfonate sheets. Due to the good crystallinity of the samples and the presence of sharp non-basal peaks in their X-ray diffraction patterns, Miller indices of the non-basal peaks in the diffraction patterns calculated from the models can be compared with those found in the experimental data. This allowed us to precisely describe for example (15 5-2) planes, from which mutual distances of the phenyl rings were determined to be 2.62 Å. Graphical Abstract Detailed ball and stick view into the interlayer structure of ZrSPhP1.3.

摘要

采用经典分子模拟方法对通式为Zr(HOSCHPO) (CHPO)·yHO(x = 0.7 - 2;y = 0或2)的4 - 磺基苯基膦酸锆和苯基膦酸锆4 - 磺基苯基膦酸盐进行了详细的结构描述。首先,针对水合(y = 2)和脱水(y = 0)的4 - 磺基苯基膦酸锆(x = 2)化合物计算了描述其结构的模型。随后,计算了两种混合的苯基膦酸锆4 - 磺基苯基膦酸盐(x = 1.3和0.7)的模型。优化后的模型表明,磺酸基团之间水分子的存在形成了一个具有氢键体系的水 - 磺酸盐层。我们认为这种排列是水合样品比脱水样品具有更高质子传导率的原因。当水分子被去除时,观察到层间距略有减小(约0.06 Å)。模拟模型证实了这种行为,其中除了水分子的缺失以及两个相邻磺酸盐片层之间氢键数量减少外,脱水时结构没有显著变化。由于样品具有良好的结晶性且其X射线衍射图谱中存在尖锐的非基面峰,因此可以将从模型计算得到的衍射图谱中非基面峰的米勒指数与实验数据中的进行比较。这使我们能够精确描述例如(15 5 - 2)平面,据此确定苯环的相互距离为2.62 Å。图形摘要ZrSPhP1.3层间结构的详细球棍视图。

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本文引用的文献

1
Ewald Summation for Molecular Simulations.用于分子模拟的埃瓦尔德求和法
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A three-dimensional tin(II) phosphonatobenzenesulfonate with Sn4O12 clusters.一种具有Sn4O12簇的三维苯磺酸膦酸锡(II)。
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