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An Expanded Maize Gene Expression Atlas based on RNA Sequencing and its Use to Explore Root Development.基于 RNA 测序的扩展玉米基因表达图谱及其在根系发育研究中的应用
Plant Genome. 2016 Mar;9(1). doi: 10.3835/plantgenome2015.04.0025.
2
Maize endosperm-specific transcription factors O2 and PBF network the regulation of protein and starch synthesis.玉米胚乳特异性转录因子O2和PBF构成蛋白质和淀粉合成调控的网络。
Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10842-7. doi: 10.1073/pnas.1613721113. Epub 2016 Sep 12.
3
Quantitative Multilevel Analysis of Central Metabolism in Developing Oilseeds of Oilseed Rape during in Vitro Culture.油菜籽离体培养过程中发育种子中央代谢的定量多水平分析
Plant Physiol. 2015 Jul;168(3):828-48. doi: 10.1104/pp.15.00385. Epub 2015 May 5.
4
MetaboAnalyst 3.0--making metabolomics more meaningful.MetaboAnalyst 3.0——让代谢组学更具意义。
Nucleic Acids Res. 2015 Jul 1;43(W1):W251-7. doi: 10.1093/nar/gkv380. Epub 2015 Apr 20.
5
Arabidopsis uses two gluconeogenic gateways for organic acids to fuel seedling establishment.拟南芥利用两种糖异生途径来利用有机酸为幼苗生长提供能量。
Nat Commun. 2015 Apr 10;6:6659. doi: 10.1038/ncomms7659.
6
Genome-wide characterization of cis-acting DNA targets reveals the transcriptional regulatory framework of opaque2 in maize.顺式作用DNA靶点的全基因组特征揭示了玉米中opaque2的转录调控框架。
Plant Cell. 2015 Mar;27(3):532-45. doi: 10.1105/tpc.114.134858. Epub 2015 Feb 17.
7
Dynamic transcriptome landscape of maize embryo and endosperm development.玉米胚和胚乳发育的动态转录组图谱
Plant Physiol. 2014 Sep;166(1):252-64. doi: 10.1104/pp.114.240689. Epub 2014 Jul 18.
8
Recent advances in the study of prolamin storage protein organization and function.直链淀粉贮藏蛋白的结构与功能研究进展。
Front Plant Sci. 2014 Jun 20;5:276. doi: 10.3389/fpls.2014.00276. eCollection 2014.
9
Temporal patterns of gene expression in developing maize endosperm identified through transcriptome sequencing.通过转录组测序确定的发育中的玉米胚乳中基因表达的时间模式。
Proc Natl Acad Sci U S A. 2014 May 27;111(21):7582-7. doi: 10.1073/pnas.1406383111. Epub 2014 May 12.
10
Inhibition of triosephosphate isomerase by phosphoenolpyruvate in the feedback-regulation of glycolysis.磷酸烯醇丙酮酸对糖酵解的反馈调节中三磷酸甘油醛异构酶的抑制作用。
Open Biol. 2014 Mar 5;4(3):130232. doi: 10.1098/rsob.130232.

编码丙酮酸磷酸二激酶的玉米基因在发育胚乳中的功能。

Functions of maize genes encoding pyruvate phosphate dikinase in developing endosperm.

机构信息

Roy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, IA 50011.

Horticultural Sciences Department, University of Florida, Gainesville, FL 32611.

出版信息

Proc Natl Acad Sci U S A. 2018 Jan 2;115(1):E24-E33. doi: 10.1073/pnas.1715668115. Epub 2017 Dec 18.

DOI:10.1073/pnas.1715668115
PMID:29255019
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5776816/
Abstract

Maize () mutations are beneficial for endosperm nutritional quality but cause negative pleiotropic effects for reasons that are not fully understood. Direct targets of the bZIP transcriptional regulator encoded by include and that specify pyruvate phosphate dikinase (PPDK). This enzyme reversibly converts AMP, pyrophosphate, and phosphoenolpyruvate to ATP, orthophosphate, and pyruvate and provides diverse functions in plants. This study addressed PPDK function in maize starchy endosperm where it is highly abundant during grain fill. and were inactivated individually by transposon insertions, and both genes were simultaneously targeted by endosperm-specific RNAi. accounts for the large majority of endosperm PPDK, whereas specifies the abundant mesophyll form. The mutation is seedling-lethal, indicating that C4 photosynthesis is essential in maize. RNAi expression in transgenic endosperm eliminated detectable PPDK protein and enzyme activity. Transgenic kernels weighed the same on average as nontransgenic siblings, with normal endosperm starch and total N contents, indicating that PPDK is not required for net storage compound synthesis. An opaque phenotype resulted from complete PPDK knockout, including loss of vitreous endosperm character similar to the phenotype conditioned by -. Concentrations of multiple glycolytic intermediates were elevated in transgenic endosperm, energy charge was altered, and starch granules were more numerous but smaller on average than normal. The data indicate that PPDK modulates endosperm metabolism, potentially through reversible adjustments to energy charge, and reveal that - mutations can affect the opaque phenotype through regulation of PPDK in addition to their previously demonstrated effects on storage protein gene expression.

摘要

玉米突变是有益的胚乳营养品质,但由于某些原因导致其具有负的多效性效应,这些原因还不完全清楚。由 bZIP 转录因子编码的直接靶标包括和,指定丙酮酸磷酸二激酶(PPDK)。该酶可逆地将 AMP、焦磷酸和磷酸烯醇丙酮酸转化为 ATP、正磷酸盐和丙酮酸,并在植物中提供多种功能。本研究解决了 PPDK 在玉米淀粉胚乳中的功能,在灌浆期间,它在胚乳中高度丰富。和分别通过转座子插入失活,并且这两个基因都被胚乳特异性 RNAi 靶向。负责胚乳 PPDK 的绝大部分,而指定丰富的叶肉形式。突变是幼苗致死的,表明 C4 光合作用在玉米中是必不可少的。转基因胚乳中的 RNAi 表达消除了可检测的 PPDK 蛋白和酶活性。转基因核仁的平均重量与非转基因同系物相同,胚乳淀粉和总氮含量正常,表明 PPDK 不是净储存化合物合成所必需的。完全敲除 PPDK 导致不透明表型,包括类似由 - 条件的玻璃质胚乳特征的丧失。在转基因胚乳中,多个糖酵解中间产物的浓度升高,能量电荷发生改变,淀粉颗粒的数量更多,但平均而言比正常情况下更小。这些数据表明,PPDK 调节胚乳代谢,可能通过对能量电荷的可逆调节,并且表明 - 突变可以通过调节 PPDK 来影响不透明表型,除了它们对储存蛋白基因表达的先前证明的影响之外。