RNA Editing Laboratory, Oncohaematology Department, IRCCS Ospedale Pediatrico Bambino Gesù, Viale di San Paolo, 15, 00146 Rome, Italy.
Media Laboratory and McGovern Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Nucleic Acids Res. 2018 Feb 28;46(4):2045-2059. doi: 10.1093/nar/gkx1257.
Recent studies have reported the emerging role of microRNAs (miRNAs) in human cancers. We systematically characterized miRNA expression and editing in the human brain, which displays the highest number of A-to-I RNA editing sites among human tissues, and in de novo glioblastoma brain cancer. We identified 299 miRNAs altered in their expression and 24 miRNAs differently edited in human brain compared to glioblastoma tissues. We focused on the editing site within the miR-589-3p seed. MiR-589-3p is a unique miRNA almost fully edited (∼100%) in normal brain and with a consistent editing decrease in glioblastoma. The edited version of miR-589-3p inhibits glioblastoma cell proliferation, migration and invasion, while the unedited version boosts cell proliferation and motility/invasion, thus being a potential cancer-promoting factor. We demonstrated that the editing of this miRNA is mediated by ADAR2, and retargets miR-589-3p from the tumor-suppressor PCDH9 to ADAM12, which codes for the metalloproteinase 12 promoting glioblastoma invasion. Overall, our study dissects the role of a unique brain-specific editing site within miR-589-3p, with important anticancer features, and highlights the importance of RNA editing as an essential player not only for diversifying the genomic message but also for correcting not-tolerable/critical genomic coding sites.
最近的研究报告指出 microRNAs(miRNAs)在人类癌症中的作用不断浮现。我们系统性地描述了人类大脑中的 miRNA 表达和编辑情况,人类大脑中的 A-to-I RNA 编辑位点数量在所有人体组织中最高,并且在新发胶质母细胞瘤脑癌中也是如此。我们发现 299 种 miRNA 的表达发生了改变,24 种 miRNA 在人类大脑和胶质母细胞瘤组织之间的编辑方式不同。我们专注于 miR-589-3p 种子区内的编辑位点。miR-589-3p 是一种几乎完全编辑(约 100%)的独特 miRNA,在正常大脑中,而在胶质母细胞瘤中则持续减少编辑。miR-589-3p 的编辑版本可抑制胶质母细胞瘤细胞的增殖、迁移和侵袭,而未编辑版本则促进细胞增殖和运动/侵袭,因此是一种潜在的致癌因素。我们证明了这种 miRNA 的编辑由 ADAR2 介导,并将 miR-589-3p 的靶标从肿瘤抑制因子 PCDH9 重新靶向到 ADAM12,ADAM12 编码促进胶质母细胞瘤侵袭的金属蛋白酶 12。总的来说,我们的研究剖析了 miR-589-3p 内一个独特的大脑特异性编辑位点的作用,具有重要的抗癌特征,并强调了 RNA 编辑作为一个重要的参与者的重要性,不仅可以多样化基因组信息,还可以纠正不可容忍/关键的基因组编码位点。