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来自完整胭脂碱Ti质粒的高水平双链转移DNA(T-DNA)加工。

High levels of double-stranded transferred DNA (T-DNA) processing from an intact nopaline Ti plasmid.

作者信息

Steck T R, Close T J, Kado C I

机构信息

Department of Plant Pathology, University of California, Davis 95616.

出版信息

Proc Natl Acad Sci U S A. 1989 Apr;86(7):2133-7. doi: 10.1073/pnas.86.7.2133.

DOI:10.1073/pnas.86.7.2133
PMID:2928322
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC286865/
Abstract

To obtain bacterial-mediated oncogenic transformation of plants, the transferred DNA (T-DNA) of the tumor-inducing (Ti) plasmid of Agrobacterium tumefaciens is transferred to its plant host cells during infection. The initial phases of transformation involve the processing of the T-DNA in the bacterial cell after induction of the vir genes located on the Ti plasmid. The kinetics and conditions of this processing were examined and upon induction with acetosyringone up to 40% of the left and right borders of the T-DNA were cleaved. This cleavage was dependent upon virA, virG, and VirD and was rec-independent. Processed T-DNA was observed within 30 min after induction and was delayed by an increased concentration of phosphate in the induction medium. When DNA was isolated in the absence of protease treatment, the DNA fragment corresponding to the left side of the cut at both the left and right border region exhibited gel retardation, suggesting one or more "pilot" proteins may be involved in T-DNA transfer. Although the relative abundance of a processed product does not necessarily imply relative importance, the preponderance of double-stranded cleavage products suggests that double-stranded T-DNA should be considered as a possible intermediate in T-DNA transfer.

摘要

为实现细菌介导的植物致癌转化,在感染过程中,根癌土壤杆菌的致瘤(Ti)质粒的转移DNA(T-DNA)会转移至其植物宿主细胞。转化的初始阶段涉及在Ti质粒上的vir基因诱导后,细菌细胞中T-DNA的加工处理。对这种加工处理的动力学和条件进行了研究,用乙酰丁香酮诱导后,高达40%的T-DNA左右边界被切割。这种切割依赖于virA、virG和VirD,且与rec无关。诱导后30分钟内观察到加工后的T-DNA,诱导培养基中磷酸盐浓度增加会使其延迟出现。当在无蛋白酶处理的情况下分离DNA时,在左右边界区域切割处左侧对应的DNA片段出现凝胶滞后现象,表明可能有一个或多个“先导”蛋白参与T-DNA转移。虽然加工产物的相对丰度不一定意味着相对重要性,但双链切割产物的优势表明双链T-DNA应被视为T-DNA转移过程中的一种可能中间体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/66bbeacd015f/pnas00247-0022-e.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/49504758b14c/pnas00247-0020-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/def74f55ad05/pnas00247-0020-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/e9169a066b50/pnas00247-0021-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/7f1911783e97/pnas00247-0021-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/c162d5af9ab5/pnas00247-0021-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/359e4c2ec5de/pnas00247-0022-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/28100f1ec1f6/pnas00247-0022-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/7d4daf5e421a/pnas00247-0022-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/9d587884aca5/pnas00247-0022-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/66bbeacd015f/pnas00247-0022-e.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/49504758b14c/pnas00247-0020-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/def74f55ad05/pnas00247-0020-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/e9169a066b50/pnas00247-0021-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/7f1911783e97/pnas00247-0021-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/c162d5af9ab5/pnas00247-0021-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/359e4c2ec5de/pnas00247-0022-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/28100f1ec1f6/pnas00247-0022-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/7d4daf5e421a/pnas00247-0022-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/9d587884aca5/pnas00247-0022-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49a0/286865/66bbeacd015f/pnas00247-0022-e.jpg

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本文引用的文献

1
Single-Stranded DNA Binding Protein Encoded by the virE Locus of Agrobacterium tumefaciens.农杆菌 virE 基因座编码的单链 DNA 结合蛋白。
Science. 1988 Apr 22;240(4851):501-4. doi: 10.1126/science.240.4851.501.
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Site-Specific Nick in the T-DNA Border Sequence as a Result of Agrobacterium vir Gene Expression.T-DNA 边界序列中特定位点的 Nick 是由农杆菌 vir 基因表达引起的。
Science. 1987 Jan 30;235(4788):587-91. doi: 10.1126/science.235.4788.587.
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Absence in monocotyledonous plants of the diffusible plant factors inducing T-DNA circularization and vir gene expression in Agrobacterium.
根癌土壤杆菌将单链转移DNA(T-DNA)转移到植物细胞核中。
Proc Natl Acad Sci U S A. 1994 Aug 16;91(17):8000-4. doi: 10.1073/pnas.91.17.8000.
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T-DNA transfer to maize cells: histochemical investigation of beta-glucuronidase activity in maize tissues.T-DNA 向玉米细胞的转移:玉米组织中β-葡萄糖醛酸酶活性的组织化学研究
Proc Natl Acad Sci U S A. 1993 Feb 15;90(4):1488-92. doi: 10.1073/pnas.90.4.1488.
5
Agrobacterium transcriptional regulator Ros is a prokaryotic zinc finger protein that regulates the plant oncogene ipt.农杆菌转录调节因子Ros是一种原核锌指蛋白,可调节植物致癌基因ipt。
Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):5293-8. doi: 10.1073/pnas.95.9.5293.
6
The Agrobacterium tumefaciens virB4 gene product is an essential virulence protein requiring an intact nucleoside triphosphate-binding domain.根癌土壤杆菌virB4基因产物是一种必需的毒力蛋白,需要完整的核苷三磷酸结合结构域。
J Bacteriol. 1993 Mar;175(6):1723-34. doi: 10.1128/jb.175.6.1723-1734.1993.
7
The VirD2 protein of Agrobacterium tumefaciens carries nuclear localization signals important for transfer of T-DNA to plant.根癌土壤杆菌的VirD2蛋白携带对T-DNA转移至植物至关重要的核定位信号。
Mol Gen Genet. 1993 Jun;239(3):345-53. doi: 10.1007/BF00276932.
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J Bacteriol. 1994 Jun;176(11):3210-7. doi: 10.1128/jb.176.11.3210-3217.1994.
9
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10
Covalently bound VirD2 protein of Agrobacterium tumefaciens protects the T-DNA from exonucleolytic degradation.根癌土壤杆菌的共价结合VirD2蛋白可保护T-DNA免受核酸外切酶降解。
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单子叶植物中缺乏可扩散的植物因子,这些因子可诱导农杆菌中的T-DNA环化和vir基因表达。
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T-DNA from Agrobacterium Ti plasmid is in the nuclear DNA fraction of crown gall tumor cells.农杆菌 Ti 质粒的 T-DNA 存在于冠瘿瘤细胞的核 DNA 中。
Proc Natl Acad Sci U S A. 1980 Jul;77(7):4060-4. doi: 10.1073/pnas.77.7.4060.
8
Ti plasmid vector for the introduction of DNA into plant cells without alteration of their normal regeneration capacity.Ti 质粒载体可将 DNA 导入植物细胞而不改变其正常的再生能力。
EMBO J. 1983;2(12):2143-50. doi: 10.1002/j.1460-2075.1983.tb01715.x.
9
A 3.6-kbp segment from the vir region of Ti plasmids contains genes responsible for border-sequence-directed production of T region circles in E. coli.来自Ti质粒vir区域的一个3.6千碱基对片段包含负责在大肠杆菌中进行边界序列导向的T区域环产生的基因。
EMBO J. 1986 Jun;5(6):1129-35. doi: 10.1002/j.1460-2075.1986.tb04337.x.
10
Indoleacetic acid complementation and its relation to host range specifying genes on the Ti plasmid of Agrobacterium tumefaciens.吲哚乙酸互补作用及其与根癌土壤杆菌Ti质粒上宿主范围决定基因的关系。
Mol Gen Genet. 1982;188(3):425-32. doi: 10.1007/BF00330044.