• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

由TrwC介导的IncW质粒R388的oriT处不依赖于接合作用的位点特异性重组。

Conjugation-independent, site-specific recombination at the oriT of the IncW plasmid R388 mediated by TrwC.

作者信息

Llosa M, Bolland S, Grandoso G, de la Cruz F

机构信息

Departamento de Biología Molecular, Universidad de Cantabria, Santander, Spain.

出版信息

J Bacteriol. 1994 Jun;176(11):3210-7. doi: 10.1128/jb.176.11.3210-3217.1994.

DOI:10.1128/jb.176.11.3210-3217.1994
PMID:8195075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC205490/
Abstract

Plasmids containing a direct repeat of plasmid R388 oriT are capable of site-specific recombination, which results in deletion of the intervening DNA. This reaction occurs in the presence, but not in the absence, of the region of R388 implicated in DNA processing during conjugation. This region contains three genes, trwA, trwB, and trwC. By using mutants of each of the three genes, it was demonstrated that only trwC is required for the oriT-specific recombination. Further analysis showed that the N-terminal 272 amino acids of the protein are sufficient to catalyze recombination. TrwC is also capable of promoting intermolecular recombination between two plasmids containing oriT, suggesting that double-strand breaks in both plasmid DNAs are involved in the process. Additionally, intramolecular recombination between R388 oriT and R46 oriT did not occur in the presence of both nickases. This suggests that the half-reactions at each oriT are not productive if they occur separately; therefore, an interaction between the recombination complexes formed at each recombining site is required. This is the first report in which a nicking-closing enzyme involved in conjugal DNA transfer promotes oriT-specific recombination of double-stranded DNA in the absence of conjugation.

摘要

含有质粒R388 oriT直接重复序列的质粒能够进行位点特异性重组,这会导致中间DNA的缺失。该反应在存在参与接合过程中DNA加工的R388区域时发生,但在不存在该区域时不发生。该区域包含三个基因,trwA、trwB和trwC。通过使用这三个基因各自的突变体,证明oriT特异性重组仅需要trwC。进一步分析表明,该蛋白质的N端272个氨基酸足以催化重组。TrwC还能够促进两个含有oriT的质粒之间的分子间重组,这表明两个质粒DNA中的双链断裂都参与了该过程。此外,在两种切口酶存在的情况下,R388 oriT和R46 oriT之间未发生分子内重组。这表明如果每个oriT处的半反应单独发生则没有效果;因此,在每个重组位点形成的重组复合物之间需要相互作用。这是第一份关于参与接合DNA转移的切口-封闭酶在无接合情况下促进双链DNA的oriT特异性重组的报告。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4727/205490/54a84b74c84a/jbacter00029-0131-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4727/205490/54a84b74c84a/jbacter00029-0131-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4727/205490/54a84b74c84a/jbacter00029-0131-a.jpg

相似文献

1
Conjugation-independent, site-specific recombination at the oriT of the IncW plasmid R388 mediated by TrwC.由TrwC介导的IncW质粒R388的oriT处不依赖于接合作用的位点特异性重组。
J Bacteriol. 1994 Jun;176(11):3210-7. doi: 10.1128/jb.176.11.3210-3217.1994.
2
Nicking activity of TrwC directed against the origin of transfer of the IncW plasmid R388.TrwC对IncW质粒R388转移起始位点的切口活性
J Mol Biol. 1995 Feb 10;246(1):54-62. doi: 10.1006/jmbi.1994.0065.
3
Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells.接合松弛酶在受体细胞中的位点特异性重组酶和整合酶活性。
Proc Natl Acad Sci U S A. 2005 Nov 8;102(45):16385-90. doi: 10.1073/pnas.0506081102. Epub 2005 Oct 31.
4
Functional domains in protein TrwC of plasmid R388: dissected DNA strand transferase and DNA helicase activities reconstitute protein function.质粒R388的蛋白质TrwC中的功能域:剖析后的DNA链转移酶和DNA解旋酶活性重建蛋白质功能。
J Mol Biol. 1996 Nov 22;264(1):56-67. doi: 10.1006/jmbi.1996.0623.
5
A new domain of conjugative relaxase TrwC responsible for efficient oriT-specific recombination on minimal target sequences.接合松弛酶TrwC的一个新结构域,负责在最小靶序列上进行高效的oriT特异性重组。
Mol Microbiol. 2006 Nov;62(4):984-96. doi: 10.1111/j.1365-2958.2006.05437.x. Epub 2006 Oct 13.
6
oriT-processing and regulatory roles of TrwA protein in plasmid R388 conjugation.TrwA蛋白在质粒R388接合中的oriT加工及调控作用
J Mol Biol. 1997 Jul 11;270(2):188-200. doi: 10.1006/jmbi.1997.1082.
7
Genetic organization of the conjugal DNA processing region of the IncW plasmid R388.IncW质粒R388接合DNA加工区域的遗传组织
J Mol Biol. 1994 Jan 14;235(2):448-64. doi: 10.1006/jmbi.1994.1005.
8
Two active-site tyrosyl residues of protein TrwC act sequentially at the origin of transfer during plasmid R388 conjugation.蛋白质TrwC的两个活性位点酪氨酸残基在质粒R388接合过程中于转移起点处依次发挥作用。
J Mol Biol. 2000 Feb 4;295(5):1163-72. doi: 10.1006/jmbi.1999.3425.
9
Site-specific integration of foreign DNA into minimal bacterial and human target sequences mediated by a conjugative relaxase.通过一种可转移的松弛酶介导,使外源 DNA 特异性地整合到最小的细菌和人类靶序列中。
PLoS One. 2012;7(1):e31047. doi: 10.1371/journal.pone.0031047. Epub 2012 Jan 23.
10
NikAB- or NikB-dependent intracellular recombination between tandemly repeated oriT sequences of plasmid R64 in plasmid or single-stranded phage vectors.质粒或单链噬菌体载体中质粒R64串联重复oriT序列之间的NikAB或NikB依赖性细胞内重组。
J Bacteriol. 2003 Jul;185(13):3871-7. doi: 10.1128/JB.185.13.3871-3877.2003.

引用本文的文献

1
Off-Target Integron Activity Leads to Rapid Plasmid Compensatory Evolution in Response to Antibiotic Selection Pressure.非靶标整合子活性导致质粒在抗生素选择压力下快速补偿进化。
mBio. 2023 Apr 25;14(2):e0253722. doi: 10.1128/mbio.02537-22. Epub 2023 Feb 22.
2
DNA Delivery and Genomic Integration into Mammalian Target Cells through Type IV A and B Secretion Systems of Human Pathogens.通过人类病原体的IV型A和B分泌系统将DNA递送至哺乳动物靶细胞并实现基因组整合
Front Microbiol. 2017 Aug 22;8:1503. doi: 10.3389/fmicb.2017.01503. eCollection 2017.
3
Substrate translocation involves specific lysine residues of the central channel of the conjugative coupling protein TrwB.

本文引用的文献

1
Relaxase (TraI) of IncP alpha plasmid RP4 catalyzes a site-specific cleaving-joining reaction of single-stranded DNA.IncPα质粒RP4的松弛酶(TraI)催化单链DNA的位点特异性切割-连接反应。
Proc Natl Acad Sci U S A. 1993 Apr 1;90(7):2925-9. doi: 10.1073/pnas.90.7.2925.
2
Genetic organization of the conjugal DNA processing region of the IncW plasmid R388.IncW质粒R388接合DNA加工区域的遗传组织
J Mol Biol. 1994 Jan 14;235(2):448-64. doi: 10.1006/jmbi.1994.1005.
3
Initiation and termination of DNA transfer at F plasmid oriT.F质粒oriT处DNA转移的起始与终止
底物转运涉及接合偶联蛋白TrwB中央通道的特定赖氨酸残基。
Mol Genet Genomics. 2017 Oct;292(5):1037-1049. doi: 10.1007/s00438-017-1331-3. Epub 2017 Jun 8.
4
Host Range of the Conjugative Transfer System of IncP-9 Naphthalene-Catabolic Plasmid NAH7 and Characterization of Its oriT Region and Relaxase.IncP-9萘降解质粒NAH7接合转移系统的宿主范围及其oriT区域和松弛酶的特性
Appl Environ Microbiol. 2016 Dec 15;83(1). doi: 10.1128/AEM.02359-16. Print 2017 Jan 1.
5
Mob/oriT, a mobilizable site-specific recombination system for unmarked genetic manipulation in Bacillus thuringiensis and Bacillus cereus.Mob/oriT,一种用于苏云金芽孢杆菌和蜡样芽孢杆菌中无标记基因操作的可移动位点特异性重组系统。
Microb Cell Fact. 2016 Jun 10;15(1):108. doi: 10.1186/s12934-016-0492-9.
6
Site-specific integration of foreign DNA into minimal bacterial and human target sequences mediated by a conjugative relaxase.通过一种可转移的松弛酶介导,使外源 DNA 特异性地整合到最小的细菌和人类靶序列中。
PLoS One. 2012;7(1):e31047. doi: 10.1371/journal.pone.0031047. Epub 2012 Jan 23.
7
Small plasmids harboring qnrB19: a model for plasmid evolution mediated by site-specific recombination at oriT and Xer sites.携带有 qnrB19 的小质粒:一个通过 oriT 和 Xer 位点的位点特异性重组介导的质粒进化模型。
Antimicrob Agents Chemother. 2012 Apr;56(4):1821-7. doi: 10.1128/AAC.06036-11. Epub 2012 Jan 30.
8
Transfer of R388 derivatives by a pathogenesis-associated type IV secretion system into both bacteria and human cells.致病性 IV 型分泌系统将 R388 衍生物转入细菌和人细胞。
J Bacteriol. 2011 Nov;193(22):6257-65. doi: 10.1128/JB.05905-11. Epub 2011 Sep 9.
9
ZouA, a putative relaxase, is essential for dna amplification in Streptomyces kanamyceticus.ZouA,一种假定的松弛酶,对于链霉菌中 DNA 的扩增是必需的。
J Bacteriol. 2011 Apr;193(8):1815-22. doi: 10.1128/JB.01325-10. Epub 2011 Feb 4.
10
Nuclear targeting of a bacterial integrase that mediates site-specific recombination between bacterial and human target sequences.将细菌整合酶靶向定位于细菌和人靶序列之间的特异性重组的部位。
Appl Environ Microbiol. 2011 Jan;77(1):201-10. doi: 10.1128/AEM.01371-10. Epub 2010 Oct 29.
Mol Microbiol. 1994 Feb;11(3):449-58. doi: 10.1111/j.1365-2958.1994.tb00326.x.
4
Replication of a plasmid containing two origins of bacteriophage.含有两个噬菌体复制起点的质粒的复制
J Mol Biol. 1981 Nov 25;153(1):169-76. doi: 10.1016/0022-2836(81)90532-5.
5
Sequence-specific recombination of plasmid ColE1.质粒ColE1的序列特异性重组
Proc Natl Acad Sci U S A. 1980 Nov;77(11):6724-8. doi: 10.1073/pnas.77.11.6724.
6
The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.pUC质粒,一种源自M13mp7的用于插入诱变和使用合成通用引物进行测序的系统。
Gene. 1982 Oct;19(3):259-68. doi: 10.1016/0378-1119(82)90015-4.
7
Genetic and molecular characterization of Tn21, a multiple resistance transposon from R100.1.来自R100.1的多重耐药转座子Tn21的遗传和分子特征分析
J Bacteriol. 1982 Jul;151(1):222-28. doi: 10.1128/jb.151.1.222-228.1982.
8
Enzymatic properties of the bacteriophage phi X174 A protein on superhelical phi X174 DNA: a model for the termination of the rolling circle DNA replication.噬菌体φX174 A蛋白对超螺旋φX174 DNA的酶学特性:滚环DNA复制终止的模型
Nucleic Acids Res. 1981 May 11;9(9):2037-53. doi: 10.1093/nar/9.9.2037.
9
Restriction endonuclease cleavage map of pKM101: relationship to parental plasmid R46.pKM101的限制性内切核酸酶切割图谱:与亲本质粒R46的关系。
Mol Gen Genet. 1981;182(2):268-72. doi: 10.1007/BF00269669.
10
Rapid and efficient cosmid cloning.快速高效的黏粒克隆
Nucleic Acids Res. 1981 Jul 10;9(13):2989-98. doi: 10.1093/nar/9.13.2989.