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转录组分析揭示与 中叶片花色素苷生物合成相关的转录因子。

Transcriptomic Analysis Reveals Transcription Factors Related to Leaf Anthocyanin Biosynthesis in .

机构信息

College of Landscape Architecture and Art, Northwest A&F University, Yangling 712100, Shaanxi, China.

National Engineering Research Center for Oil Peony, Yangling 712100, Shaanxi, China.

出版信息

Molecules. 2017 Dec 8;22(12):2186. doi: 10.3390/molecules22122186.

Abstract

is a wild species of tree peony. has good ornamental value owing to its leaf color change in spring. So far, the molecular mechanism of leaf color change in is unclear. This study analyzes the anthocyanin level and transcriptome of two different color stages in leaf. The purplish-red leaf stage is rich in anthocyanin, while the green leaf has very low levels of anthocyanin. Transcriptome analysis reveals that 6678 differentially-expressed genes (DEGs) are up-regulated, and 14,667 are down-regulated in the purplish-red leaf. Among these DEGs, 40 MYB (v-myb avian myeloblastosis viral oncogene homolog) genes, 40 bHLH (MYC-like basic helix-loop-helix) genes, and 15 WD40 (WD-repeat protein) genes were found. Based on phylogenetic and alignment analysis with the deduced amino acid sequences with known transcription factors, Unigene0024459 (MYB1) is likely the R2R3-MYB that promotes anthocyanin biosynthesis; Unigene0050761 (MYB2) is likely the R2R3-MYB that represses anthocyanin biosynthesis; Unigene0005081 (bHLH1) and Unigene0006146 (WD40-1) are likely the bHLH and WD40 that participate in regulating anthocyanin biosynthesis. Additionally, quantitative RT-PCR results confirmed the transcriptome analyses for key genes.

摘要

是一种野生牡丹品种。因其春季叶片变色,具有良好的观赏价值。迄今为止,牡丹叶片变色的分子机制尚不清楚。本研究分析了 2 个不同颜色阶段叶片的花色素苷水平和转录组。紫红色叶片富含花色素苷,而绿色叶片花色素苷含量极低。转录组分析表明,6678 个差异表达基因(DEGs)在紫红色叶片中上调,14667 个基因下调。在这些 DEGs 中,发现了 40 个 MYB(v-myb 禽成髓细胞瘤病毒癌基因同源物)基因、40 个 bHLH(MYC-like basic helix-loop-helix)基因和 15 个 WD40(WD-repeat protein)基因。基于与已知转录因子的推导氨基酸序列进行的系统发育和比对分析,Unigene0024459(MYB1)可能是促进花青素生物合成的 R2R3-MYB;Unigene0050761(MYB2)可能是抑制花青素生物合成的 R2R3-MYB;Unigene0005081(bHLH1)和 Unigene0006146(WD40-1)可能是参与调控花青素生物合成的 bHLH 和 WD40。此外,定量 RT-PCR 结果证实了关键基因的转录组分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/766b/6149671/aa3c43691cb8/molecules-22-02186-g001.jpg

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