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来自人类共生菌和污水处理厂分离株的全球系统发育群模式。

Worldwide Phylogenetic Group Patterns of from Commensal Human and Wastewater Treatment Plant Isolates.

作者信息

Stoppe Nancy de Castro, Silva Juliana S, Carlos Camila, Sato Maria I Z, Saraiva Antonio M, Ottoboni Laura M M, Torres Tatiana T

机构信息

Centro de Biologia Molecular e Engenharia Genética, Universidade Estadual de Campinas, Campinas, Brazil.

Núcleo de Pesquisa em Biodiversidade e Computação (BioComp-USP)-Universidade de São Paulo, São Paulo, Brazil.

出版信息

Front Microbiol. 2017 Dec 21;8:2512. doi: 10.3389/fmicb.2017.02512. eCollection 2017.

Abstract

is an important microorganism in the gastrointestinal tract of warm-blooded animals. Commensal populations of consist of stable genetic isolates, which means that each individual has only one phylogenetic group (phylogroup). We evaluated the frequency of human commensal phylogroups from 116 people and observed that the majority of isolates belonged to group A. We also evaluated the frequency of phylogroups in wastewater samples and found a strong positive correlation between the phylogroup distribution in wastewater and human hosts. In order to find out if some factors, such as geographical location, and climate could influence the worldwide phylogroup distribution, we performed a meta-analysis of 39 different studies and 24 countries, including different climates, living areas, and feeding habits. Unexpectedly, our results showed no substructuring patterns of phylogroups; indicating there was no correlation between phylogroup distribution and geographic location, climate, living area, feeding habits, or date of collection.

摘要

是温血动物胃肠道中的一种重要微生物。的共生菌群由稳定的遗传分离株组成,这意味着每个个体只有一个系统发育群(系统群)。我们评估了116人的人类共生系统群的频率,观察到大多数分离株属于A组。我们还评估了废水样本中系统群的频率,发现废水和人类宿主中的系统群分布之间存在很强的正相关。为了确定地理位置和气候等因素是否会影响全球系统群分布,我们对包括不同气候、生活区域和饮食习惯在内的39项不同研究和24个国家进行了荟萃分析。出乎意料的是,我们的结果显示系统群没有亚结构模式;这表明系统群分布与地理位置、气候、生活区域、饮食习惯或采集日期之间没有相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26c/5742620/0290374a6556/fmicb-08-02512-g0001.jpg

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