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磷酸酶的共享促进磷酸化级联反应中的响应可塑性。

Sharing of Phosphatases Promotes Response Plasticity in Phosphorylation Cascades.

机构信息

Department of Systems and Synthetic Microbiology, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany; LOEWE Research Center for Synthetic Microbiology (SYNMIKRO), Marburg, Germany.

Modelling of Biological Networks Group, Institute of Molecular Biology (IMB), Mainz, Germany.

出版信息

Biophys J. 2018 Jan 9;114(1):223-236. doi: 10.1016/j.bpj.2017.10.037.

DOI:10.1016/j.bpj.2017.10.037
PMID:29320690
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5773761/
Abstract

Sharing of positive or negative regulators between multiple targets is frequently observed in cellular signaling cascades. For instance, phosphatase sharing between multiple kinases is ubiquitous within the MAPK pathway. Here we investigate how such phosphatase sharing could shape robustness and evolvability of the phosphorylation cascade. Through modeling and evolutionary simulations, we demonstrate that 1) phosphatase sharing dramatically increases robustness of a bistable MAPK response, and 2) phosphatase-sharing cascades evolve faster than nonsharing cascades. This faster evolution is particularly pronounced when evolving from a monostable toward a bistable phenotype, whereas the transition speed of a population from a bistable to monostable response is not affected by phosphatase sharing. This property may enable the phosphatase-sharing design to adapt better in a changing environment. Analysis of the respective mutational landscapes reveal that phosphatase sharing reduces the number of limiting mutations required for transition from monostable to bistable responses, hence facilitating a faster transition to such response types. Taken together, using MAPK cascade as an example, our study offers a general theoretical framework to explore robustness and evolutionary plasticity of signal transduction cascades.

摘要

在细胞信号级联中,多个靶标之间的正调节剂或负调节剂的共享是经常观察到的。例如,在 MAPK 途径中,多个激酶之间的磷酸酶共享是普遍存在的。在这里,我们研究了这种磷酸酶共享如何影响磷酸化级联的鲁棒性和可进化性。通过建模和进化模拟,我们证明了:1)磷酸酶共享极大地增加了双稳态 MAPK 反应的鲁棒性,2)磷酸酶共享级联比非共享级联进化得更快。当从单稳态向双稳态表型进化时,这种更快的进化尤其明显,而群体从双稳态向单稳态反应的过渡速度不受磷酸酶共享的影响。这种特性可能使磷酸酶共享设计在不断变化的环境中更好地适应。对各自突变景观的分析表明,磷酸酶共享减少了从单稳态到双稳态反应所需的限制突变的数量,从而促进了向这种反应类型的更快过渡。总之,以 MAPK 级联为例,我们的研究提供了一个通用的理论框架,用于探索信号转导级联的鲁棒性和进化可塑性。

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