Aich Pulakesh, Biswas Sampa
Crystallography and Molecular Biology Division, Saha Institute of Nuclear Physics, 1/AF Bidhannagar, Kolkata, 700 064, India.
Center for Self-Assembly and Complexity, Institute for Basic Science, Pohang University of Science and Technology, Pohang, Republic of Korea.
Cell Biochem Biophys. 2018 Jun;76(1-2):219-229. doi: 10.1007/s12013-017-0838-x. Epub 2018 Jan 10.
Pro-domain of a cysteine cathepsin contains a highly conserved ExRxFxNxIxN (ERFNIN) motif. The zymogen structure of cathepsins revealed that the Arg(R) residue of the motif is a central residue of a salt-bridge/H-bond network, stabilizing the scaffold of the pro-domain. Importance of the arginine is also demonstrated in studies where a single mutation (Arg → Trp) in human lysosomal cathepsin K (hCTSK) is linked to a bone-related genetic disorder "Pycnodysostosis". In the present study, we have characterized in vitro Arg → Trp mutant of hCTSK and the same mutant of hCTSL. The R → W mutant of hCTSK revealed that this mutation leads to an unstable zymogen that is spontaneously activated and auto-proteolytically degraded rapidly. In contrast, the same mutant of hCTSL is sufficiently stable and has proteolytic activity almost like its wild-type counterpart; however it shows an altered zymogen activation condition in terms of pH, temperature and time. Far and near UV circular dichroism and intrinsic tryptophan fluorescence experiments have revealed that the mutation has minimal effect on structure of the protease hCTSL. Molecular modeling studies shows that the mutated Trp31 in hCTSL forms an aromatic cluster with Tyr23 and Trp30 leading to a local stabilization of pro-domain and supplements the loss of salt-bridge interaction mediated by Arg31 in wild-type. In hCTSK-R31W mutant, due to presence of a non-aromatic Ser30 residue such interaction is not possible and may be responsible for local instability. These differences may cause detrimental effects of R31W mutation on the regulation of hCTSK auto-activation process compared to altered activation process in hCTSL.
半胱氨酸组织蛋白酶的前结构域包含一个高度保守的ExRxFxNxIxN(ERFNIN)基序。组织蛋白酶的酶原结构表明,该基序中的精氨酸(R)残基是盐桥/氢键网络的中心残基,可稳定前结构域的支架。在人类溶酶体组织蛋白酶K(hCTSK)中单个突变(精氨酸→色氨酸)与一种骨相关遗传病“致密性成骨不全症”相关的研究中,也证明了精氨酸的重要性。在本研究中,我们对hCTSK的体外精氨酸→色氨酸突变体以及hCTSL的相同突变体进行了表征。hCTSK的R→W突变体表明,这种突变导致一种不稳定的酶原,该酶原会自发激活并迅速自蛋白水解降解。相比之下,hCTSL的相同突变体足够稳定,并且具有几乎与其野生型对应物相同的蛋白水解活性;然而,它在pH、温度和时间方面显示出改变的酶原激活条件。远紫外和近紫外圆二色性以及内在色氨酸荧光实验表明,该突变对蛋白酶hCTSL的结构影响最小。分子模拟研究表明,hCTSL中突变的Trp31与Tyr23和Trp30形成芳香族簇,导致前结构域局部稳定,并补充了野生型中由Arg31介导的盐桥相互作用的丧失。在hCTSK-R31W突变体中,由于存在非芳香族的Ser30残基,这种相互作用不可能发生,这可能是导致局部不稳定的原因。与hCTSL中改变的激活过程相比,这些差异可能导致R31W突变对hCTSK自激活过程的调节产生有害影响。